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Emailsachin.pundhirbric.kudk
Websitehttps://www.bric.ku.dk/research/porse_group/

Københavns Universitet, BRIC, Ole Maaløes Vej 5
2200 København N

Research activity per year

13 Journal article
1 Conference abstract in journal

14 results

2019
Mutant CEBPA directly drives the expression of the targetable tumor-promoting factor CD73 in AML
Jakobsen, J. S., Laursen, L. G., Schuster, M. B., Pundhir, S., Schoof, E., Ge, Y., d'Altri, T., Vitting-Seerup, K., Rapin, N., Gentil, C., Jendholm, J., Theilgaard-Mönch, K., Reckzeh, K., Bullinger, L., Döhner, K., Hokland, P., Fitzgibbon, J. & Porse, B. T., 2019, In: Science Advances. 5, 7, p. 1-16 17 p., eaaw4304.
Research output: Contribution to journal › Journal article › Research › peer-review
8 Citations (Scopus)

9 Downloads (Pure)
The splicing factor RBM25 controls MYC activity in acute myeloid leukemia
Ge, Y., Schuster, M. B., Pundhir, S., Rapin, N., Bagger, F. O., Sidiropoulos, N., Hashem, N. & Porse, B. T., 1 Dec 2019, In: Nature Communications. 10, 1, 14 p., 172.
Research output: Contribution to journal › Journal article › Research › peer-review
7 Citations (Scopus)

57 Downloads (Pure)
2018
Differences in Cell Cycle Status Underlie Transcriptional Heterogeneity in the HSC Compartment
Lauridsen, F. KB., Jensen, T. L., Rapin, N., Aslan, D., Wilhelmson, A. S., Pundhir, S., Rehn, M., Paul, F., Giladi, A., Hasemann, M. S., Serup, P., Amit, I. & Porse, B. T., 17 Jul 2018, In: Cell Reports. 24, 3, p. 766-780 15 p.
Research output: Contribution to journal › Journal article › Research › peer-review
16 Citations (Scopus)

83 Downloads (Pure)
Enhancer and Transcription Factor Dynamics during Myeloid Differentiation Reveal an Early Differentiation Block in Cebpa null Progenitors
Pundhir, S., Bratt Lauridsen, F. K., Schuster, M. B., Jakobsen, J. S., Ge, Y., Schoof, E. M., Rapin, N. P. J-P., Waage, J., Hasemann, M. S. & Porse, B. T., 29 May 2018, In: Cell Reports. 23, 9, p. 2744-2757 14 p.
Research output: Contribution to journal › Journal article › Research › peer-review
9 Citations (Scopus)

56 Downloads (Pure)
2016

Adipocyte gene expression and DNA methylation patterns differ significantly between lean and obese pigs
Jacobsen, M. J., Havgaard, J. H., Mentzel, C. M. J., Sørensen, P. M., Pundhir, S., Anthon, C., Karlskov-Mortensen, P., Bruun, C. V. S., Cirera Salicio, S., Gorodkin, J., Jorgensen, C. B., Barrès, R. & Fredholm, M., 9 Nov 2016, In: Journal of Animal Science. 94, Supplement 4, p. 46-47 2 p., P2019.
Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis
Bagger, F. O., Sasivarevic, D., Hadi Sohi, S., Laursen, L. G., Pundhir, S., Sønderby, C. K., Winther, O., Rapin, N. & Porse, B. T., 4 Jan 2016, In: Nucleic Acids Research. 44, D1, p. D917-24 8 p.
Research output: Contribution to journal › Journal article › Research › peer-review
141 Citations (Scopus)

102 Downloads (Pure)
Peak-valley-peak pattern of histone modifications delineates active regulatory elements and their directionality
Pundhir, S., Bagger, F. O., Lauridsen, F. K. B., Rapin, N. P. J-P. & Porse, B. T., 19 May 2016, In: Nucleic Acids Research. 44, 9, p. 4037-4051 15 p.
Research output: Contribution to journal › Journal article › Research › peer-review
11 Citations (Scopus)

161 Downloads (Pure)
2015
Differential and coherent processing patterns from small RNAs
Pundhir, S. & Gorodkin, J., 13 Jul 2015, In: Scientific Reports. 5, 16 p., 12062.
Research output: Contribution to journal › Journal article › Research › peer-review
15 Citations (Scopus)

77 Downloads (Pure)
Emerging applications of read profiles towards the functional annotation of the genome
Pundhir, S., Poirazi, P. & Gorodkin, J., 19 May 2015, In: Frontiers in Genetics. 6, 11 p., 188.
Research output: Contribution to journal › Journal article › Research › peer-review
6 Citations (Scopus)

95 Downloads (Pure)
2014
Spatially conserved regulatory elements identified within human and mouse Cd247 gene using high-throughput sequencing data from the ENCODE project.
Pundhir, S., Hannibal, T. D., Bang-Berthelsen, C. H., Wegener, A-M. K., Pociot, F., Holmberg, D. I. & Gorodkin, J., 15 Jul 2014, In: Gene. 545, 1, p. 80-87 8 p.
Research output: Contribution to journal › Journal article › Research › peer-review
5 Citations (Scopus)
Structured RNAs and synteny regions in the pig genome
Anthon, C., Tafer, H., Havgaard, J. H., Thomsen, B., Hedegaard, J., Seemann, E. S., Pundhir, S., Kehr, S., Bartschat, S., Nielsen, M., Nielsen, R. O., Fredholm, M., Stadler, P. F. & Gorodkin, J., 10 Jun 2014, In: BMC Genomics. 15, 27 p., 459.
Research output: Contribution to journal › Journal article › Research › peer-review
16 Citations (Scopus)

913 Downloads (Pure)
2012
DeepBlockAlign: a tool for aligning RNA-seq profiles of read block patterns
Langenberger, D., Pundhir, S., Ekstrøm, C. T., Stadler, P. F., Hoffmann, S. & Gorodkin, J., Jan 2012, In: Bioinformatics. 28, 1, p. 17-24 8 p.
Research output: Contribution to journal › Journal article › Research › peer-review
17 Citations (Scopus)
2011

SSPred: a prediction server based on SVM for the identification and classification of protein involved in bacterial secretion systems.
Pundhir, S. & Kumar, A., 2011, In: Bioinformation. 6, 10, p. 380-382 3 p.
Research output: Contribution to journal › Journal article › Research › peer-review
2008

PredictBias: a server for the identification of genomic and pathogenicity islands in prokaryotes
Pundhir, S. & Kumar, A., 2008, In: In Silico Biology. 8, 3-4, p. 223-234 12 p.
Research output: Contribution to journal › Journal article › Research › peer-review

24 Citations (Scopus)

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Research output

Search results