Research output per year
Research output per year
Personal profile
Short presentation
Description of my research interests, activities and complete list of peer reviewed papers can be found at the home page for Center for non-coding RNA in Technology and Health: http://rth.dk and at the research group website: http://ivh.ku.dk/bioinformatics.
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Research output
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Using GPU to accelerate the pairwise structural RNA alignment with base pair probabilities
Sundfeld, D., Teodoro, G., Havgaard, J. H., Gorodkin, J. & Melo, A. C. M. A., 25 May 2020, In: Concurrency Computation. e5468.Research output: Contribution to journal › Journal article › Research › peer-review
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A splice-site variant in the lncRNA gene RP1-140A9.1 cosegregates in the large Volkmann cataract family
Eiberg, H., Mikkelsen, A. F., Bak, M., Tommerup, N., Lund, A. M., Wenzel, A., Sabarinathan, R., Gorodkin, J., Bang-Berthelsen, C. H. & Hansen, L., 2019, In: Molecular Vision. 25, p. 1-11 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Cytoscape stringApp: Network analysis and visualization of proteomics data
Doncheva, N. T., Morris, J., Gorodkin, J. & Jensen, L. J., 1 Feb 2019, In: Journal of Proteome Research. 18, 2, p. 623-632Research output: Contribution to journal › Journal article › Research › peer-review
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Inferring disease-associated long non-coding RNAs using genome - wide tissue expression profiles
Pan, X., Jensen, L. J. & Gorodkin, J., 1 May 2019, In: Bioinformatics. 35, 9, p. 1494-1502 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Production of stellate cells from induced pluripotent stem cells to study Alzheimer's disease pathology
Mogus, L., Bergmann, T. B., Liu, Y., Lee, J., Pfisterer, U. G., Handfield, L.-F., Asenjo Martinez, A., Seemann, E. S., Witter, M., Khodosevich, K., Gorodkin, J., Hemberg, M., Pers, T. H. & Hall, V. J., 2019. 1 p.Research output: Contribution to conference › Conference abstract for conference › Communication
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RNAcentral: a hub of information for non-coding RNA sequences
Gorodkin, J., Seemann, E. S. & The RNAcentral Constortium , 2019, In: Nucleic Acids Research. 47, D1, p. D221–D229Research output: Contribution to journal › Journal article › Research › peer-review
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Sandwich cortial lamination and single-cell analysis decodes the developing spatial processing system
Liu, Y., Bergmann, T. B., Lee, J., Pfisterer, U. G., Handfield, L.-F., Mori, Y., Asenjo Martinez, A., Lisa Vargas, I., Seemann, E. S., Lee, J. T. H., Patikis, N., Peralvo Vidal, J. M., Pihl, M., Kornum, B. R., Thomsen, P. D., Hyttel, P., Witter, M., Khodosevich, K., Gorodkin, J. & Hemberg, M. & 2 others, , 2019. 45 p.Research output: Contribution to conference › Paper › Communication
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Special issue: Computational analysis of RNA structure and function
Gorodkin, J., 2019, In: Genes. 10, 1, 3 p., 55.Research output: Contribution to journal › Editorial