Research output per year
Research output per year
Search results
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2019
Cytoscape stringApp: Network analysis and visualization of proteomics data
Doncheva, N. T., Morris, J., Gorodkin, J. & Jensen, L. J., 1 Feb 2019, In: Journal of Proteome Research. 18, 2, p. 623-632Research output: Contribution to journal › Journal article › Research › peer-review
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Near-Neighbor Interactions in the NS3-4A Protease of HCV Impact Replicative Fitness of Drug-Resistant Viral Variants
Doncheva, N. T., Domingues, F. S., McGivern, D. R., Shimakami, T., Zeuzem, S., Lengauer, T., Lange, C. M., Albrecht, M. & Welsch, C., 31 May 2019, In: Journal of Molecular Biology. 431, 12, p. 2354-2368Research output: Contribution to journal › Journal article › Research › peer-review
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STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
Szklarczyk, D., Gable, A. L., Lyon, D., Junge, A., Wyder, S., Huerta-Cepas, J., Simonovic, M., Doncheva, N. T., Morris, J. H., Bork, P., Jensen, L. J. & von Mering, C., 8 Jan 2019, In: Nucleic Acids Research. 47, D1, p. D607-D613 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Transcriptome landscape of protein-coding genes and long noncoding RNAs in the colon and blood of DSS-induced mouse model of Acute ulcerative colitis
Yarani, R., Palasca, O., Doncheva, N. T., Anthon, C., Pilecki, B., Litman, T., Holmskov, U., Jensen, L. J., Gorodkin, J. & Pociot, F., 2019, In: Journal of Crohn's and Colitis. 13, p. S129-S130Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
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2018
Consistent Prediction of Mutation Effect on Drug Binding in HIV-1 Protease Using Alchemical Calculations
Bastys, T., Gapsys, V., Doncheva, N. T., Kaiser, R., De Groot, B. L. & Kalinina, O. V., 10 Jul 2018, In: Journal of Chemical Theory and Computation. 14, 7, p. 3397-3408Research output: Contribution to journal › Journal article › Research › peer-review
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Viruses.STRING: A Virus-Host Protein-Protein Interaction Database
Cook, H. V., Doncheva, N. T., Szklarczyk, D., von Mering, C. & Jensen, L. J., 2018, In: Viruses. 10, 10, p. 1-11 519.Research output: Contribution to journal › Journal article › Research › peer-review
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2017
The STRING database in 2017: quality-controlled protein-protein association networks, made broadly accessible
Szklarczyk, D., Morris, J. H., Cook, H., Kuhn, M., Wyder, S., Simonovic, M., Santos Delgado, A., Doncheva, N. T., Roth, A., Bork, P., Jensen, L. J. & von Mering, C., Jan 2017, In: Nucleic Acids Research. 45, D1, p. D362-D368Research output: Contribution to journal › Journal article › Research › peer-review