Department of Biology

2019

Big Impact of the Tiny: Bacteriophage–Bacteria Interactions in Biofilms

Hansen, M. F., Svenningsen, S. L., Røder, H. L., Middelboe, M. & Burmølle, M., Sept 2019, In: Trends in Microbiology. 27, 9, p. 739-752 14 p.

Research output: Contribution to journal › Review › peer-review

24 Citations (Scopus)

BIN overlap confirms transcontinental distribution of pest aphids (Hemiptera:Aphididae)

Naseem, M. T., Ashfaq, M., Khan, A. M., Rasool, A., Asif, M. & Hebert, P. D. N., 1 Dec 2019, In: PLoS ONE. 14, 12, p. e0220426

Research output: Contribution to journal › Journal article › Research › peer-review

Biodiversitet: Hvad skal vi med vilde jordbier og andre vilde jordboer?

Bruun, H. H., 16 Nov 2019

Research output: Other contribution › Net publication - Internet publication › Communication

Biodiversiteten er i tilbagegang – også på statens arealer

Ejrnæs, R., Svenning, J-C., Bruun, H. H., Heilmann-Clausen, J., Rahbek, C. & Hansen, M. D. D., 22 Jan 2019, In: Altinget.dk. 1 p.

Research output: Contribution to journal › Contribution to newspaper - Comment/debate

Biodiversity response to forest structure and management: Comparing species richness, conservation relevant species and functional diversity as metrics in forest conservation: comparing species richness, conservation relevant species and functional diversity as metrics in forest conservation

Lelli, C., Bruun, H. H., Chiarucci, A., Donati, D., Frascaroli, F., Fritz, Ö., Goldberg, I., Nascimbene, J., Tøttrup, A. P., Rahbek, C. & Heilmann-Clausen, J., 2019, In: Forest Ecology and Management. 432, p. 707-717 11 p.

Research output: Contribution to journal › Journal article › Research › peer-review

28 Citations (Scopus)

Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices and experimental design for genomic studies

Matos-Maraví, P., Ritter, C. D., Barnes, C. J., Nielsen, M., Olsson, U., Wahlberg, N., Marquina, D., Sääksjärvi, I. & Antonelli, A., 2019, In: PeerJ. 7, p. 1-31 e6727.

Research output: Contribution to journal › Journal article › Research › peer-review

9 Citations (Scopus)

37 Downloads (Pure)

Biological adaptations in the Arctic cervid, the reindeer (Rangifer tarandus)

Lin, Z., Chen, L., Chen, X., Zhong, Y., Yang, Y., Xia, W., Liu, C., Zhu, W., Wang, H., Yan, B., Yang, Y., Liu, X., Kvie, K. S., Røed, K. H., Wang, K., Xiao, W., Wei, H., Li, G., Heller, R., Gilbert, M. T. P., & 3 othersQiu, Q., Wang, W. & Li, Z., 2019, In: Science. 364, 6446, p. 1154-+ 7 p., eaav6312.

Research output: Contribution to journal › Journal article › Research › peer-review

12 Citations (Scopus)

Biological transformation of Arctic dissolved organic matter in a NE Greenland fjord

Paulsen, M. L., Müller, O., Larsen, A., Møller, E. F., Middelboe, M., Sejr, M. K. & Stedmon, C., May 2019, In: Limnology and Oceanography. 64, 3, p. 1014-1033

Research output: Contribution to journal › Journal article › Research › peer-review

8 Citations (Scopus)

17 Downloads (Pure)

Bio-optical properties and radiative energy budgets in fed and unfed scleractinian corals (Pocillopora sp.) during thermal bleaching

Heidelberg Lyndby, N., Holm, J. B., Wangpraseurt, D., Ferrier-Pagès, C. & Kühl, M., 24 Oct 2019, In: Marine Ecology - Progress Series. 629, p. 1-17

Research output: Contribution to journal › Journal article › Research › peer-review

2 Citations (Scopus)

7 Downloads (Pure)

Biophysical and Mechanistic Models for Disease-Causing Protein Variants

Stein, A., Fowler, D. M., Hartmann-Petersen, R. & Lindorff-Larsen, K., Jul 2019, In: Trends in Biochemical Sciences. 44, 7, p. 575-588

Research output: Contribution to journal › Review › peer-review

33 Citations (Scopus)

Birth and Resuscitation of (p)ppGpp Induced Antibiotic Tolerant Persister Cells

Svenningsen, M. S., Veress, A., Harms, A., Mitarai, N. & Semsey, S., 1 Dec 2019, In: Scientific Reports. 9, 13 p., 6056.

Research output: Contribution to journal › Journal article › Research › peer-review

23 Citations (Scopus)

35 Downloads (Pure)

Bone diagenesis in a Mycenaean secondary burial (Kastrouli, Greece)

Kontopoulos, I., Penkman, K., Liritzis, I. & Collins, M. J., 1 Oct 2019, In: Archaeological and Anthropological Sciences. 11, 10, p. 5213-5230

Research output: Contribution to journal › Journal article › Research › peer-review

16 Citations (Scopus)

7 Downloads (Pure)

Brief oxygenation events in locally anoxic oceans during the Cambrian solves the animal breathing paradox

Dahl, T., Siggaard-Andersen, M-L., Schovsbo, E. H., Persson, D. O., Husted, S., Hougard, I. W., Dickson, A. J., Kjaer, K. & Ielsen, A. T. N., 1 Dec 2019, In: Scientific Reports. 9, 9 p., 11669.

Research output: Contribution to journal › Journal article › Research › peer-review

6 Citations (Scopus)

16 Downloads (Pure)

Broad North Atlantic distribution of a meiobenthic annelid – against all odds

Worsaae, K., Kerbl, A., Vang, Á. & Gonzalez, B. C., 2019, In: Scientific Reports. 9, 13 p., 15497.

Research output: Contribution to journal › Journal article › Research › peer-review

9 Citations (Scopus)

6 Downloads (Pure)

Bronzevejbi: metalskinnet under solens stråler

Madsen, H. B. & Dupont, Y. L., 2019, In: Tidsskrift for Biavl. 153, 9, p. 293

Research output: Contribution to journal › Journal article › Communication

38 Downloads (Pure)

Building mountain biodiversity: geological and evolutionary processes

Rahbek, C., Borregaard, M. K., Antonelli, A., K. Colwell, R., Holt, B. G., Nogues, D. B., Mac Ørum, C., Richardson, K., Rosing, M. T., Whittaker, R. J. & Fjeldså, J., 13 Sept 2019, In: Science. 365, 6458, p. 1114-1119 6 p.

Research output: Contribution to journal › Review › peer-review

68 Citations (Scopus)

CAGEfightR: analysis of 5'-end data using R/Bioconductor

Thodberg, M., Thieffry, A., Vitting-Seerup, K., Andersson, R. & Sandelin, A., 4 Oct 2019, In: BMC Bioinformatics. 20, 13 p., 487.

Research output: Contribution to journal › Journal article › Research › peer-review

5 Citations (Scopus)

8 Downloads (Pure)

Can additive beta diversity be reliably partitioned into nestedness and turnover components?

Matthews, T. J., Aspin, T. W. H., Ulrich, W., Baselga, A., Kubota, Y., Proios, K., Triantis, K. A., Whittaker, R. J. & Strona, G., Aug 2019, In: Global Ecology and Biogeography. 28, 8, p. 1146-1154

Research output: Contribution to journal › Journal article › Research › peer-review

1 Citation (Scopus)

Can interaction specificity in the fungus-farming termite symbiosis be explained by nutritional requirements of the fungal crop?

da Costa, R. R., Vreeburg, S. M. E., Shik, J. Z., Aanen, D. K. & Poulsen, M., Apr 2019, In: Fungal Ecology. 38, p. 54-61

Research output: Contribution to journal › Journal article › Research › peer-review

7 Citations (Scopus)

46 Downloads (Pure)

Can plant traits predict seed dispersal probability via red deer guts, fur, and hooves?

Petersen, T. K. & Bruun, H. H., 1 Sept 2019, In: Ecology and Evolution. 9, 17, p. 9768-9781 14 p.

Research output: Contribution to journal › Journal article › Research › peer-review

12 Downloads (Pure)

Carbon dioxide fluxes of air-exposed sediments and desiccating ponds

Martinsen, K. T., Kragh, T. & Sand-Jensen, K., 30 Jul 2019, In: Biogeochemistry. 144, 2, p. 165-180

Research output: Contribution to journal › Journal article › Research › peer-review

9 Citations (Scopus)

Catchment properties and the photosynthetic trait composition of freshwater plant communities

Iversen, L. L., Winkel, A., Baastrup-Spohr, L., Hinke, A. B., Alahuhta, J., Baattrup-Pedersen, A., Birk, S., Brodersen, P., Chambers, P. A., Ecke, F., Feldmann, T., Gebler, D., Heino, J., Jespersen, T. S., Moe, S. J., Riis, T., Sass, L., Vestergaard, O., Maberly, S. C., Sand-jensen, K., & 1 othersPedersen, O., 15 Nov 2019, In: Science. 366, 6467, p. 878-881 4 p.

Research output: Contribution to journal › Journal article › Research › peer-review

32 Citations (Scopus)

CCR5-Delta 32 is deleterious in the homozygous state in humans

Wei, X. & Nielsen, R., Jun 2019, In: Nature Medicine. 25, 6, p. 909-+

Research output: Contribution to journal › Journal article › Research › peer-review

34 Citations (Scopus)

Cellular functions and molecular mechanisms of non-lysine ubiquitination

McClellan, A. J., Laugesen, S. H. & Ellgaard, L., 2019, In: Open Biology. 9, 9, 16 p., 190147.

Research output: Contribution to journal › Review › peer-review

24 Citations (Scopus)

12 Downloads (Pure)

Cellular signalling by primary cilia in development, organ function and disease

Anvarian, Z., Mykytyn, K., Mukhopadhyay, S., Pedersen, L. B. & Christensen, S. T., 1 Apr 2019, In: Nature Reviews Nephrology. 15, p. 199-219

Research output: Contribution to journal › Review › peer-review

105 Citations (Scopus)

Changes in host ant communities of Alcon Blue butterflies in abandoned mountain hay meadows

Tartally, A., Nash, D. R., Varga, Z. & Lengyel, S., 1 Nov 2019, In: Insect Conservation and Diversity. 12, 6, p. 492-500 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

4 Citations (Scopus)

7 Downloads (Pure)

Changes in trophic state and aquatic communities in high Arctic ponds in response to increasing goose populations

Jensen, T. C., Walseng, B., Hessen, D. O., Dimante-Deimantovica, I., Novichkova, A. A., Chertoprud, E. S., Chertoprud, M. V., Sakharova, E. G., Krylov, A. V., Frisch, D. & Christoffersen, K. S., Jul 2019, In: Freshwater Biology. 64, 7, p. 1241-1254

Research output: Contribution to journal › Journal article › Research › peer-review

4 Citations (Scopus)

Characterisation of chitin in the cuticle of a velvet worm (Onychophora)

Greven, H., Kaya, M., Sargin, I., Baran, T., Kristensen, R. M. & Sorensen, M. V., 2019, In: Turkish Journal of Zoology. 43, 5, p. 416-424

Research output: Contribution to journal › Journal article › Research › peer-review

1 Citation (Scopus)

8 Downloads (Pure)

Characterization and validation of somatic mutation spectrum to reveal heterogeneity in gastric cancer by single cell sequencing

Peng, L., Xing, R., Liu, D., Bao, L., Cheng, W., Wang, H., Yu, Y., Liu, X., Jiang, L., Wu, Y., An, Z., Liang, Q., Kim, R. N., Shin, Y. K., Yang, H., Wang, J., Yu, J., Zhang, X., Xu, X., Yang, J., & 3 othersWu, K., Zhu, S. & Lu, Y., 28 Feb 2019, In: Science Bulletin. 64, 4, p. 236-244

Research output: Contribution to journal › Journal article › Research › peer-review

1 Citation (Scopus)

Characterization of a Highly Virulent Edwardsiella anguillarum Strain Isolated From Greek Aquaculture, and a Spontaneously Induced Prophage Therein

Katharios, P., Kalatzis, P. G., Kokkari, C., Pavlidis, M. & Wang, Q., 2019, In: Frontiers in Microbiology. 10, p. 1-12 141.

Research output: Contribution to journal › Journal article › Research › peer-review

7 Citations (Scopus)

56 Downloads (Pure)

Characterization of Extracellular Biosurfactants Expressed by a Pseudomonas putida Strain Isolated from the Interior of Healthy Roots from Sida hermaphrodita Grown in a Heavy Metal Contaminated Soil

Bernat, P., Nesme, J., Paraszkiewicz, K., Schloter, M. & Płaza, G., 1 Nov 2019, In: Current Microbiology. 76, 11, p. 1320-1329 10 p.

Research output: Contribution to journal › Journal article › Research › peer-review

6 Citations (Scopus)

Characterization of Hailey-Hailey Disease-mutants in presence and absence of wild type SPCA1 using Saccharomyces cerevisiae as model organism

Muncanovic, D., Justesen, M. H., Preisler, S. S. & Pedersen, P. A., 1 Dec 2019, In: Scientific Reports. 9, 25 p., 12442.

Research output: Contribution to journal › Journal article › Research › peer-review

4 Citations (Scopus)

8 Downloads (Pure)

Characterization of host associated microbiota under influencing factors: A case study on human gut and Brachypodium root

Wei, S., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

Research output: Book/Report › Ph.D. thesis

Characterizing Gene Expression and Fragility of the Fragile Site Gene PARK2

Voutsinos, V., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

Research output: Book/Report › Ph.D. thesis

Checklist of the Sarcophagidae (Diptera) of Croatia, with new records from Croatia and other Mediterranean countries

Krcmar, S., Whitmore, D., Pape, T. & Buenaventura, E., 18 Mar 2019, In: ZooKeys. 831, p. 95-155

Research output: Contribution to journal › Journal article › Research › peer-review

2 Citations (Scopus)

12 Downloads (Pure)

Chemical ecology of fish-killing microalgae: Toxins, toxin production and the effects on the marine food web

Binzer, S. B., 2019, Department of Biology, Faculty of Science, University of Copenhagen.

Research output: Book/Report › Ph.D. thesis

Climate change and pastoralists: perceptions and adaptation in montane Kenya

Cuni-Sanchez, A., Omeny, P., Pfeifer, M., Olaka, L., Mamo, M. B., Marchant, R. & Burgess, N. D., 3 Jul 2019, In: Climate and Development. 11, 6, p. 513-524

Research output: Contribution to journal › Journal article › Research › peer-review

16 Citations (Scopus)

Climate shapes mammal community trophic structures and humans simplify them

Mendoza, M. & Araujo, M. B., 1 Dec 2019, In: Nature Communications. 10, 9 p., 5197.

Research output: Contribution to journal › Journal article › Research › peer-review

4 Citations (Scopus)

2 Downloads (Pure)

Climate tipping points - too risky to bet against

Richardson, K., Lenton, T. M., Rockström, J., Gaffney, O., Rahmstorf, S., Steffen, W. & Schellnhuber, H. J., 28 Nov 2019, In: Nature. 575, p. 592-595 3 p.

Research output: Contribution to journal › Journal article › Research › peer-review

213 Citations (Scopus)

Cmr3 regulates the suppression on cyclic oligoadenylate synthesis by tag complementarity in a Type III-B CRISPR-Cas system

Guo, T., Zheng, F., Zeng, Z., Yang, Y., Li, Q., She, Q. & Han, W., 3 Oct 2019, In: RNA Biology. 16, 10, p. 1513-1520

Research output: Contribution to journal › Journal article › Research › peer-review

5 Citations (Scopus)

Co-existing species of Drapetis Meigen in Skane (S Sweden) with description of a new species and a key to males of NW European species (Diptera: Hybotidae)

Michelsen, V. & Grootaert, P., 1 Jul 2019, In: Zootaxa. 4624, 3, p. 431-441

Research output: Contribution to journal › Journal article › Research › peer-review

1 Citation (Scopus)

Combined U-corrected Pb-Pb dating and Al-26-Mg-26 systematics of individual chondrules - Evidence for a reduced initial abundance of Al-26 amongst inner Solar System chondrules

Bollard, J., Kawasaki, N., Sakamoto, N., Olsen, M., Itoh, S., Larsen, K., Wielandt, D., Schiller, M., Connelly, J. N., Yurimoto, H. & Bizzarro, M., 1 Sept 2019, In: Geochimica et Cosmochimica Acta. 260, p. 62-83

Research output: Contribution to journal › Journal article › Research › peer-review

17 Citations (Scopus)

17 Downloads (Pure)

Combining evolutionary inference and metabolomics to identify plants with medicinal potential

Mawalagedera, S., Callahan, D., Gaskett, A., Rønsted, N. & Symonds, M. RE., 18 Jul 2019, In: Frontiers in Ecology and Evolution. 7, 11 p., 267.

Research output: Contribution to journal › Review › peer-review

15 Downloads (Pure)

Combining probiotic Phaeobacter inhibens DSM17395 and broad-host-range vibriophage KVP40 against fish pathogenic vibrios

Rasmussen, B. B., Kalatzis, P. G., Middelboe, M. & Gram, L., 15 Nov 2019, In: Aquaculture. 513, 7 p., 734415.

Research output: Contribution to journal › Journal article › Research › peer-review

4 Citations (Scopus)

Combining ZooMS and zooarchaeology to study Late Pleistocene hominin behaviour at Fumane (Italy)

Sinet-Mathiot, V., Smith, G. M., Romandini, M., Wilcke, A., Peresani, M., Hublin, J-J. & Welker, F., 1 Dec 2019, In: Scientific Reports. 9, 13 p., 12350.

Research output: Contribution to journal › Journal article › Research › peer-review

11 Citations (Scopus)

3 Downloads (Pure)

Community richness of amphibian skin bacteria correlates with bioclimate at the global scale

Kueneman, J. G., Bletz, M. C., McKenzie, V. J., Becker, C. G., Joseph, M. B., Abarca, J. G., Archer, H., Arellano, A. L., Bataille, A., Becker, M., Belden, L. K., Crottini, A., Geffers, R., Haddad, C. F. B., Harris, R. N., Holden, W. M., Hughey, M., Jarek, M., Kearns, P. J., Kerby, J. L., & 22 othersKielgast, J., Kurabayashi, A., Longo, A. V., Loudon, A., Medina, D., Nuñez, J. J., Perl, R. G. B., Pinto-Tomás, A., Rabemananjara, F. C. E., Rebollar, E. A., Rodríguez, A., Rollins-Smith, L., Stevenson, R., Tebbe, C. C., Vargas Asensio, G., Waldman, B., Walke, J. B., Whitfield, S. M., Zamudio, K. R., Zúñiga Chaves, I., Woodhams, D. C. & Vences, M., 2019, In: Nature Ecology and Evolution. 3, 3, p. 381-389 9 p.

Research output: Contribution to journal › Journal article › Research › peer-review

21 Citations (Scopus)

Comparative activity of ceftriaxone, ciprofloxacin and gentamicin as a function of bacterial growth rate probed by Escherichia coli chromosome replication in the mouse peritonitis model

Haugan, M. S., Løbner-Olesen, A. & Frimodt-Møller, N., Feb 2019, In: Antimicrobial Agents and Chemotherapy. 63, 2, p. 1-13 e-02133-18.

Research output: Contribution to journal › Journal article › Research › peer-review

10 Citations (Scopus)

Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise

Prost, S., Armstrong, E. E., Nylander, J., Thomas, G. W. C., Suh, A., Petersen, B., Dalen, L., Benz, B. W., Blom, M. P. K., Palkopoulou, E., Ericson, P. G. P. & Irestedt, M., 1 May 2019, In: GigaScience. 8, 5, 12 p.

Research output: Contribution to journal › Journal article › Research › peer-review

7 Citations (Scopus)

15 Downloads (Pure)

Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms

Rausch, P., Rühlemann, M., Hermes, B. M., Doms, S., Dagan, T., Dierking, K., Domin, H., Fraune, S., von Frieling, J., Henschel, U., Heinsen, F-A., Höppner, M., Jahn, M. T., Jaspers, C., Kissoyan, K. A. B., Langfeldt, D., Rehman, A., Reusch, T. B. H., Roeder, T., Schmitz, R. A., & 9 othersSchulenburg, H., Soluch, R., Sommer, F., Stukenbrock, E., Weiland-Bräuer, N., Rosenstiel, P., Franke, A., Bosch, T. & Baines, J. F., 14 Sept 2019, In: Microbiome. 7, 19 p., 133.

Research output: Contribution to journal › Journal article › Research › peer-review

34 Citations (Scopus)

9 Downloads (Pure)

Comparative genomics for non-O1/O139 Vibrio cholerae isolates recovered from the Yangtze River Estuary versus V. cholerae representative isolates from serogroup O1

Gong, L., Yu, P., Zheng, H., Gu, W., He, W., Tang, Y., Wang, Y., Dong, Y., Peng, X., She, Q., Xie, L. & Chen, L., 5 Apr 2019, In: Molecular Genetics and Genomics. 294, 2, p. 417-430

Research output: Contribution to journal › Journal article › Research › peer-review

4 Citations (Scopus)

46 Downloads (Pure)

Department of Biology

Research output

Search results