Yoshiki Narimatsu

Publikation

Publikationer pr. år 2014 2014 2017 2018 2019 2019

• 19 Tidsskriftartikel
• 2 Review
• 1 Kommentar/debat
• 1 Konferenceabstrakt i tidsskrift

Publikationer pr. år

Publikationer pr. år

Søgeresultater

• 2019

  An Atlas of Human Glycosylation Pathways Enables Display of the Human Glycome by Gene Engineered Cells

  Narimatsu, Y., Joshi, H. J., Nason, R., Van Coillie, J., Karlsson, R., Sun, L., Ye, Z., Chen, Y-H., Schjoldager, K. T., Steentoft, C., Furukawa, S., Bensing, B. A., Sullam, P. M., Thompson, A. J., Paulson, J. C., Büll, C., Adema, G. J., Mandel, U., Hansen, L., Bennett, E. P., & 4 flereVarki, A., Vakhrushev, S. Y., Yang, Z. & Clausen, H., 25 jul. 2019, I: Molecular Cell. 75, 2, s. 394-407, e1-e5

  Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

  • Atlases 100%
  • Glycosylation 95%
  • Polysaccharides 87%
  • Genes 37%
  • Glycosyltransferases 12%
  50 Citationer (Scopus)

• A strategy for generating cancer-specific monoclonal antibodies to aberrant O-glycoproteins: identification of a novel dysadherin-Tn antibody

  Steentoft, C., Fuhrmann, M., Battisti, F., Van Coillie, J., Madsen, T. D., Campos, D., Halim, A., Vakhrushev, S. Y., Joshi, H., Schreiber, H., Mandel, U. & Narimatsu, Y., 6 feb. 2019, I: Glycobiology. 29, 4, s. 307-319 13 s.

  Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

  • O-Glycoprotein 100%
  • Epitope 56%
  • Glycoproteins 47%
  • Monoclonal Antibodies 40%
  • Antibodies 30%
  4 Citationer (Scopus)

• Erratum: Site-specific O-glycosylation of members of the low-density lipoprotein receptor superfamily enhances ligand interactions (Journal of Biological Chemistry (2018) 293 (7408-7422) DOI: 10.1074/jbc.M117.817981)

  Wang, S., Mao, Y., Narimatsu, Y., Ye, Z., Tian, W., Goth, C. K., Lira-Navarrete, E., Pedersen, N. B., Benito-Vicente, A., Martin, C., Uribe, K. B., Hurtado-Guerrero, R., Christoffersen, C., Seidah, N. G., Nielsen, R., Christensen, E. I., Hansen, L., Bennett, E. P., Vakhrushev, S. Y., Schjoldager, K. T., & 1 flereClausen, H., 24 maj 2019, I: Journal of Biological Chemistry. 294, 21, 1 s.

  Publikation: Bidrag til tidsskrift › Kommentar/debat › Forskning › peer review

  • Low-Density Lipoprotein 100%
  • LDL Receptors 99%
  • Glycosylation 88%
  • oxidized low density lipoprotein 86%
  • Ligands 60%
  2 Citationer (Scopus)

• Exploring Regulation of Protein O-Glycosylation in Isogenic Human HEK293 Cells by Differential O-Glycoproteomics

  Narimatsu, Y., Joshi, H. J., Schjoldager, K. T., Hintze, J., Halim, A., Steentoft, C., Nason, R., Mandel, U., Bennett, E. P., Clausen, H. & Vakhrushev, S. Y., 2019, I: Molecular and Cellular Proteomics. 18, 7, s. 1396-1409

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  • HEK293 Cells 100%
  • Glycosylation 94%
  • polypeptide N-acetylgalactosaminyltransferase 92%
  • Protein Isoforms 74%
  • O-Glycan 67%
  16 Citationer (Scopus)

• Multiple distinct O-Mannosylation pathways in eukaryotes

  Larsen, I. S. B., Narimatsu, Y., Clausen, H., Joshi, H. J. & Halim, A., jun. 2019, I: Current Opinion in Structural Biology. 56, s. 171-178 8 s.

  Publikation: Bidrag til tidsskrift › Review › peer review

  • Eukaryota 100%
  • Glycosylation 99%
  • Yeasts 65%
  • plexin 50%
  • Post Translational Protein Processing 33%
  9 Citationer (Scopus)

• The glycosylation design space for recombinant lysosomal replacement enzymes produced in CHO cells

  Tian, W., Ye, Z., Wang, S., Schulz, M. A., Van Coillie, J., Sun, L., Chen, Y-H., Narimatsu, Y., Hansen, L., Kristensen, C., Mandel, U., Bennett, E. P., Jabbarzadeh-Tabrizi, S., Schiffmann, R., Shen, J-S., Vakhrushev, S. Y., Clausen, H. & Yang, Z., 1 dec. 2019, I: Nature Communications. 10, 13 s., 1785.

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  • CHO Cells 100%
  • enzymes 88%
  • Glycosylation 85%
  • Polysaccharides 65%
  • Enzymes 45%
  21 Citationer (Scopus)

  10 Downloads (Pure)
• 2018

  A validated gRNA library for CRISPR/Cas9 targeting of the human glycosyltransferase genome

  Narimatsu, Y., Joshi, H. J., Zhang, Y., Gomes, C., Chen, Y-H., Lorenzetti, F., Furukawa, S., Schjoldager, K., Hansen, L., Clausen, H., Bennett, E. P. & Wandall, H. H., 1 maj 2018, I: Glycobiology. 28, 5, s. 295–305

  Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

  • Guide RNA 100%
  • Glycosyltransferases 96%
  • Clustered Regularly Interspaced Short Palindromic Repeats 82%
  • Human Genome 75%
  • Polysaccharides 67%
  29 Citationer (Scopus)

• Glycosyltransferase genes that cause monogenic congenital disorders of glycosylation are distinct from glycosyltransferase genes associated with complex diseases

  Joshi, H. J., Hansen, L., Narimatsu, Y., Freeze, H. H., Henrissat, B., Bennett, E., Wandall, H. H., Clausen, H. & Schjoldager, K. T., 1 maj 2018, I: Glycobiology. 28, 5, s. 284-294

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  • Congenital Disorders of Glycosylation 100%
  • Glycosyltransferases 86%
  • Genome-Wide Association Study 67%
  • Glycosylation 63%
  • Disorder 55%
  20 Citationer (Scopus)

• Probing the contribution of individual polypeptide GalNAc-transferase isoforms to the O-glycoproteome by inducible expression in isogenic cell lines

  Hintze, J., Ye, Z., Narimatsu, Y., Madsen, T. D., Joshi, H. J., Goth, C. K., Linstedt, A., Bachert, C., Mandel, U., Bennett, E. P., Vakhrushev, S. Y. & Schjoldager, K. T., 7 dec. 2018, I: The Journal of Biological Chemistry. 293, 49, s. 19064-19077 14 s.

  Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

  • polypeptide N-acetylgalactosaminyltransferase 100%
  • Isoenzymes 59%
  • Polypeptide 49%
  • Protein Isoforms 48%
  • Peptides 38%
  18 Citationer (Scopus)

• Site-specific O-glycosylation of members of the low-density lipoprotein receptor superfamily enhances ligand interactions

  Wang, S., Mao, Y., Narimatsu, Y., Ye, Z., Tian, W., Goth, C. K., Lira-Navarrete, E., Pedersen, N. B., Benito-Vicente, A., Martin, C., Uribe, K. B., Hurtado-Guerrero, R., Christoffersen, C., Seidah, N. G., Nielsen, R., Christensen, E. I., Hansen, L., Bennett, E. P., Vakhrushev, S. Y., Schjoldager, K. T., & 1 flereClausen, H., 11 maj 2018, I: The Journal of Biological Chemistry. 293, 19, s. 7408 –7422

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  • Low-Density Lipoprotein 100%
  • LDL Receptors 99%
  • Glycosylation 88%
  • Ligands 60%
  • LDL-Receptor Related Proteins 48%
  30 Citationer (Scopus)

• SnapShot: O-Glycosylation Pathways across Kingdoms

  Joshi, H. J., Narimatsu, Y., Schjoldager, K. T., Tytgat, H. L. P., Aebi, M., Clausen, H. & Halim, A., 25 jan. 2018, I: Cell. 172, 3, s. 632–632.e2

  Publikation: Bidrag til tidsskrift › Review › peer review

  • O-Glycan 100%
  • Glycosylation 70%
  • Polysaccharides 64%
  • Biosynthetic Pathways 41%
  • Protein Stability 40%
  30 Citationer (Scopus)

• The GAGOme: a cell-based library of displayed glycosaminoglycans

  Chen, Y-H., Narimatsu, Y., Clausen, T. M., Gomes, C., Karlsson, R., Steentoft, C., Spliid, C. B., Gustavsson, T., Salanti, A., Persson, A., Malmström, A., Willén, D., Ellervik, U., Bennett, E. P., Mao, Y., Clausen, H. & Yang, Z., 1 nov. 2018, I: Nature Methods. 15, 11, s. 881-888

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  • Glycosaminoglycan 100%
  • Glycosaminoglycans 91%
  • Libraries 76%
  • Polysaccharides 16%
  • Gene Knock-In Techniques 14%
  36 Citationer (Scopus)
• 2017

  Discovery of an O-mannosylation pathway selectively serving cadherins and protocadherins

  Larsen, I. S. B., Narimatsu, Y., Joshi, H. J., Siukstaite, L., Harrison, O. J., Brasch, J., Goodman, K. M., Hansen, L., Shapiro, L., Honig, B., Vakhrushev, S. Y., Clausen, H. & Halim, A., 17 okt. 2017, I: Proceedings of the National Academy of Sciences of the United States of America. 114, 42, s. 11163-11168 6 s.

  Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

  • Mannose 100%
  • Cadherins 86%
  • Glycosylation 48%
  • Polysaccharides 29%
  • Cobblestone Lissencephaly 14%
  35 Citationer (Scopus)

• Dynamics of Indel Profiles Induced by Various CRISPR/Cas9 Delivery Methods

  Kosicki, M., Rajan, S. S., Lorenzetti, F. C., Wandall, H. H., Narimatsu, Y., Metzakopian, E. & Bennett, E. P., 2017, I: Progress in Molecular Biology and Translational Science. 152, s. 49-67 19 s.

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  • Clustered Regularly Interspaced Short Palindromic Repeats 100%
  • Guide RNA 60%
  • Electroporation 52%
  • Gene Targeting 50%
  • Plasmids 35%
  10 Citationer (Scopus)

• Fine-tuning limited proteolysis - A novel role for regulated site-specific O-glycosylation in beta 1-Adrenergic Receptor cleavage and function

  Goth, C. K., Tuhkanen, H. E., Khan, H., Wang, S., Narimatsu, Y., Hansen, L. H., Overall, C., Clausen, H., Schjoldager, K. T. & Petaja-Repo, U., dec. 2017, I: Glycobiology. 27, 12, s. 1204-1204 84.

  Publikation: Bidrag til tidsskrift › Konferenceabstrakt i tidsskrift › Forskning › peer review

• Genome editing using FACS enrichment of nuclease-expressing cells and indel detection by amplicon analysis

  Lonowski, L. A., Narimatsu, Y., Riaz, A., Delay, C. M. E., Yang, Z., Niola, F., Duda, K., Ober, E. A., Clausen, H., Wandall, H. H., Hansen, S. H., Bennett, E. P. & Frödin, M., 1 mar. 2017, I: Nature Protocols. 12, 3, s. 581-603 23 s.

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  • Gene Editing 100%
  • Pipeline 94%
  • Clustered Regularly Interspaced Short Palindromic Repeats 62%
  • Cell Line 48%
  • Effector 44%
  54 Citationer (Scopus)

• Mammalian O-mannosylation of Cadherins and Plexins is Independent of Protein O-mannosyltransferase 1 and 2

  Larsen, I. S. B., Narimatsu, Y., Joshi, H. J., Yang, Z., Harrison, O. J., Brasch, J., Shapiro, L., Honig, B., Vakhrushev, S. Y., Clausen, H. & Halim, A., 7 jul. 2017, I: The Journal of Biological Chemistry. 292, s. 11586-11598

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  • protein O-mannosyltransferase 100%
  • plexin 83%
  • Mannose 61%
  • Cadherins 53%
  • Dystroglycans 34%
  20 Citationer (Scopus)

• Revisiting the human polypeptide GalNAc-T1 and T13 paralogs

  Festari, M. F., Trajtenberg, F., Berois, N., Pantano, S., Revoredo, L., Kong, Y., Solari-Saquieres, P., Narimatsu, Y., Freire, T., Bay, S., Robello, C., Bénard, J., Gerken, T. A., Clausen, H. & Osinaga, E., jan. 2017, I: Glycobiology. 27, 2, s. 140-153 14 s.

  Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

  • polypeptide N-acetylgalactosaminyltransferase 100%
  • Polypeptide 49%
  • Protein Isoforms 48%
  • Substrate Specificity 44%
  • Glycosylation 40%
  7 Citationer (Scopus)

• Site-specific O-Glycosylation by Polypeptide N-Acetylgalactosaminyltransferase 2 (GalNAc-transferase T2) Co-regulates β1-Adrenergic Receptor N-terminal Cleavage

  Goth, C. K., Tuhkanen, H. E., Khan, H., Lackman, J. J., Wang, S., Narimatsu, Y., Hansen, L. H., Overall, C. M., Clausen, H., Schjoldager, K. T. & Petäjä-Repo, U. E., 17 mar. 2017, I: The Journal of Biological Chemistry. 292, 11, s. 4714-4726 13 s.

  Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

  • polypeptide N-acetylgalactosaminyltransferase 100%
  • Glycosylation 61%
  • Adrenergic Receptors 56%
  • Polypeptide 49%
  • Cleavage 40%
  17 Citationer (Scopus)
• 2014

  Advances in mass spectrometry driven O-glycoproteomics

  Levery, S. B., Steentoft, C., Halim, A., Narimatsu, Y., Clausen, H. & Vakhrushev, S. Y., 2014, I: B B A - Reviews on Cancer. 1850, 1, s. 33-42 10 s.

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  • Glycosylation 100%
  • Mass Spectrometry 87%
  • Proteome 76%
  • Polysaccharides 68%
  • Glycoproteins 62%
  78 Citationer (Scopus)

• Characterization of Binding Epitopes of CA125 Monoclonal Antibodies

  da Silva, L. P. M., Narimatsu, Y., Halim, A., Vieira Campos, D. A., Yang, Z., Tarp, M. P. A., Pereira, P. J. B., Mandel, U., Bennett, E. P., Vakhrushev, S. Y., Levery, S. B., David, L. & Clausen, H., 3 jul. 2014, I: Journal of Proteome Research. 13, 7, s. 3349-59 11 s.

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  • Glycosylation 100%
  • Epitope 99%
  • Tandem Repeat Sequences 99%
  • Epitopes 83%
  • Monoclonal Antibodies 71%
  25 Citationer (Scopus)

• Low Density Lipoprotein Receptor Class A Repeats Are O-Glycosylated in Linker Regions

  Pedersen, N. B., Wang, S., Narimatsu, Y., Yang, Z., Halim, A., Schjoldager, K. T-B. G., Madsen, T. D., Seidah, N. G., Bennett, E. P., Levery, S. B. & Clausen, H., 20 jun. 2014, I: The Journal of Biological Chemistry. 289, 25, s. 17312-17324 13 s.

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  • Low-Density Lipoprotein 100%
  • LDL Receptors 99%
  • Glycosylation 58%
  • CHO Cells 17%
  • polypeptide N-acetylgalactosaminyltransferase 11%
  29 Citationer (Scopus)

• The GalNAc-type O-glycoproteome of CHO cells characterized by the SimpleCell strategy

  Yang, Z., Halim, A., Narimatsu, Y., Joshi, H. J., Steentoft, C., Schjoldager, K. T-B. G., Schulz, M. A., Sealover, N. R., Kayser, K. J., Bennett, E. P., Levery, S. B., Vakhrushev, S. Y. & Clausen, H., 1 dec. 2014, I: Molecular & Cellular Proteomics. 13, 12, s. 3224-3235 12 s.

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  • O-Glycoprotein 100%
  • Cricetulus 59%
  • Ovary 48%
  • O-Glycan 40%
  • Glycosylation 27%
  53 Citationer (Scopus)