Kristine Bohmann

Research output

Research output per year 2011 2013 2015 2016 2018 2019 2019

• 18 Journal article
• 3 Review
• 1 Ph.D. thesis
• 1 Conference abstract in journal
• 1 More
  • 1 Net publication - Internet publication

Research output per year

Research output per year

Search results

• 2019

  Promises and pitfalls of using high-throughput sequencing for diet analysis

  Alberdi, A., Aizpurua, O., Bohmann, K., Gopalakrishnan, S., Lynggaard, C., Nielsen, M. & Gilbert, M. T. P., Mar 2019, In: Molecular Ecology Resources. 19, 2, p. 327-348

  Research output: Contribution to journal › Review › peer-review

  • Prey Cleavage 100%
  • diet 58%
  • sequence analysis 49%
  • Diet 45%
  • DNA 41%
  43 Citations (Scopus)

• Skmer: assembly-free and alignment-free sample identification using genome skims

  Sarmashghi, S., Bohmann, K., Gilbert, M. T. P., Bafna, V. & Mirarab, S., 13 Feb 2019, In: Genome Biology. 20

  Research output: Contribution to journal › Journal article › Research › peer-review

  • genome 100%
  • alignment 99%
  • organelle genome 80%
  • Genome 72%
  • barcoding 59%
  17 Citations (Scopus)

  22 Downloads (Pure)

• Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North Borneo

  Drinkwater, R., Schnell, I. B., Bohmann, K., Bernard, H., Veron, G., Clare, E., Gilbert, M. T. P. & Rossiter, S. J., Jan 2019, In: Molecular Ecology Resources. 19, 1, p. 105-117

  Research output: Contribution to journal › Journal article › Research › peer-review

  • hemophagy 100%
  • Borneo 99%
  • Prey Cleavage 86%
  • leech 85%
  • Leeches 80%
  12 Citations (Scopus)

  32 Downloads (Pure)
• 2018

  Assembly-free and alignment-free sample identification using genome skims

  Sarmashghi, S., Bohmann, K., Gilbert, M. T. P., Bafna, V. & Mirarab, S., 1 Jan 2018, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10812, p. 276-277 2 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  • Genome 100%
  • Climate Change 14%
  • Biodiversity 14%
  • Anopheles 13%
  • Costs and Cost Analysis 13%

• Debugging diversity – a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool

  Schnell, I. B., Bohmann, K., Schultze, S. E., Richter, S. R., Murray, D. C., Sinding, M. H. S., Bass, D., Cadle, J. E., Campbell, M. J., Dolch, R., Edwards, D. P., Gray, T. N. E., Hansen, T., Hoa, A. N. Q., Noer, C. L., Heise-Pavlov, S., Sander Pedersen, A. F., Ramamonjisoa, J. C., Siddall, M. E., Tilker, A., & 7 othersTraeholt, C., Wilkinson, N., Woodcock, P., Yu, D. W., Bertelsen, M. F., Bunce, M. & Gilbert, M. T. P., 2018, In: Molecular Ecology Resources. 18, 6, p. 1282-1298 17 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • hemophagy 100%
  • leech 85%
  • Leeches 80%
  • Hirudinea 71%
  • vertebrate 52%
  22 Citations (Scopus)

• Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

  Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K., Carmona Baez, A., & 9 othersArias, C. F., Liu, S., Greenwood, A. D., Bertelsen, M. F., White, N. E., Bunce, M., Zhang, G., Sicheritz-Ponten, T. & Gilbert, T., 1 Apr 2018, In: Nature Ecology & Evolution. 2, 4, p. 659-668 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • bat 100%
  • microbiome 83%
  • Chiroptera 81%
  • genomics 57%
  • hemophagy 49%
  47 Citations (Scopus)

  138 Downloads (Pure)

• Scrutinizing key steps for reliable metabarcoding of environmental samples

  Alberdi, A., Aizpurua, O., Gilbert, M. T. P. & Bohmann, K., Jan 2018, In: Methods in Ecology and Evolution. 9, Special feature, p. 134-147 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • bioinformatics 100%
  • sampling 57%
  • targeting 53%
  • marker 45%
  • taxonomy 39%
  172 Citations (Scopus)

• Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure

  Bohmann, K., Gopalakrishnan, S., Nielsen, M., Nielsen, L. D. S. B., Jones, G., Streicker, D. G. & Gilbert, T., Sept 2018, In: Molecular Ecology Resources. 18, 5, p. 1050-1063 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Ecology 100%
  • Chiroptera 97%
  • bat 87%
  • DNA barcoding 81%
  • population structure 80%
  28 Citations (Scopus)

  168 Downloads (Pure)
• 2017

  Connecting Earth observation to high-throughput biodiversity data

  Bush, A., Sollmann, R., Wilting, A., Bohmann, K., Cole, B., Balzter, H., Martius, C., Zlinszky, A., Calvignac-Spencer, S., Cobbold, C. A., Dawson, T. P., Emerson, B. C., Ferrier, S., Gilbert, T., Herold, M., Jones, L., Leendertz, F. H., Matthews, L., Millington, J. D. A., Olson, J. R., & 11 othersOvaskainen, O., Raffaelli, D., Reeve, R., Rödel, M-O., Rodgers, T. W., Snape, S., Visseren-Hamakers, I., Vogler, A. P., White, P. C. L., Wooster, M. J. & Yu, D. W., 22 Jun 2017, In: Nature Ecology and Evolution. 1, 7, 0176.

  Research output: Contribution to journal › Review › peer-review

  • earth observation 100%
  • biodiversity 77%
  • ecological modeling 32%
  • biodiversity loss 28%
  • high-throughput nucleotide sequencing 28%
  88 Citations (Scopus)

• Diet determined by next generation sequencing reveals pest consumption and opportunistic foraging by bats in macadamia orchards in South Africa

  Taylor, P. J., Matamba, E., Steyn, J. N., Nangammbi, T., Zepeda Mendoza, M. L. & Bohmann, K., Dec 2017, In: Acta Chiropterologica. 19, 2, p. 239-254 16 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Macadamia 100%
  • Chiroptera 64%
  • orchards 59%
  • South Africa 59%
  • foraging 53%
  15 Citations (Scopus)
• 2016

  DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses

  Zepeda Mendoza, M. L., Bohmann, K., Baez, A. C. & Gilbert, T., 2016, In: BMC Research Notes. 9, 13 p., 255.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Filtration 100%
  • Datasets 91%
  • Error 86%
  • Length 68%
  • Polymerase Chain Reaction 68%
  26 Citations (Scopus)

  88 Downloads (Pure)

• Do vertebrate gut metagenomes confer rapid ecological adaptation?

  Alberdi, A., Aizpurua, O., Bohmann, K., Zepeda Mendoza, M. L. & Gilbert, T., 1 Sept 2016, In: Trends in Ecology & Evolution. 31, 9, p. 689-699 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • ecological adaptation 100%
  • plasticity 64%
  • vertebrate 61%
  • digestive system 54%
  • vertebrates 50%
  79 Citations (Scopus)

• First record of Vespertilio murinus from the Arabian Peninsula

  Monadjem, A., Joubert, C., Richards, L., Nielsen, I. B., Nielsen, M., Kjartansdóttir, K. R., Bohmann, K., Mourier, T. & Hansen, A. J., 2016, In: Vespertilio. 18, p. 79-89 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
• 2015

  Ancient and modern environmental DNA

  Pedersen, M. W., Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, J. S., Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, K., Cappellini, E., Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M. T. P., Hansen, A. J., Orlando, L. A. A. & Willerslev, E., 19 Jan 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 p., 20130383.

  Research output: Contribution to journal › Review › peer-review

  • Environmental DNA 100%
  • Biodiversity 40%
  • Ice 35%
  • Environment 32%
  • DNA 29%
  148 Citations (Scopus)

• Bats, Blood-Feeders and Biodiversity: Illumina Metabarcoding in Dietary Studies

  Bohmann, K., 2015, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen. 320 p.

  Research output: Book/Report › Ph.D. thesis

• Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

  Schnell, I. B., Bohmann, K. & Gilbert, M. T. P., Nov 2015, In: Molecular Ecology Resources. 15, 6, p. 1289-1303 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • jumping 100%
  • leech 78%
  • Leeches 74%
  • library 73%
  • Libraries 70%
  202 Citations (Scopus)
• 2014

  Environmental DNA for wildlife biology and biodiversity monitoring

  Bohmann, K., Evans, A., Gilbert, M. T. P., Carvalho, G. R., Creer, S., Knapp, M., Yu, D. W. & de Bruyn, M., 2014, In: Trends in Ecology & Evolution. 29, 6, p. 358-367 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • wildlife 100%
  • DNA 85%
  • biodiversity 83%
  • Biological Sciences 74%
  • monitoring 65%
  488 Citations (Scopus)

• Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter

  Hope, P. R., Bohmann, K., Gilbert, M. T. P., Zepeda Mendoza, M. L., Razgour, O. & Jones, G., 9 May 2014, In: Frontiers in Zoology. 11, 15 p., 39.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Vespertilionidae 100%
  • Myotis 96%
  • foraging behavior 95%
  • Chiroptera 69%
  • foraging 57%
  52 Citations (Scopus)

  2857 Downloads (Pure)
• 2013

  DNA detective work to solve riddles of conservation

  Bohmann, K., 2013, In: Swara. 2013, 1, p. 50-53 4 p.

  Research output: Contribution to journal › Journal article › Communication

• Hunting leeches in the dense forests of Madagascar

  Bohmann, K., 2 Aug 2013

  Research output: Other contribution › Net publication - Internet publication › Communication

• When bugs reveal biodiversity

  Bohmann, K., Schnell, I. B. & Gilbert, T., 13 Feb 2013, In: Molecular Ecology. 22, 4, p. 909-911 3 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Biodiversity 100%
  • bug 97%
  • Mammals 64%
  • biodiversity 59%
  • mammals 52%
  17 Citations (Scopus)
• 2012

  Challenges & rewards of African research: Do insect-eating bats patrol sugarcane fields in Swaziland

  Bohmann, K. & Noer, C. L., 2012, In: Bats. 30, 1, p. 2-5 4 p.

  Research output: Contribution to journal › Journal article › Communication

• Molossid bats in an African agro-ecosystem select sugarcane fields as foraging habitat

  Noer, C. L., Dabelsteen, T., Bohmann, K. & Monadjem, A., Apr 2012, In: African Zoology. 47, 1, p. 1-11 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Chiroptera 100%
  • sugarcane 96%
  • foraging 82%
  • ecosystems 79%
  • Eswatini 77%
  25 Citations (Scopus)
• 2011

  Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing

  Bohmann, K., Monadjem, A., Noer, C. L., Rasmussen, M., Zeale, M. R. K., Clare, E., Jones, G., Willerslev, E. & Gilbert, M. T. P., 2011, In: PLoS ONE. 6, 6, p. e21441 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Molossidae 100%
  • High Throughput 90%
  • Africa 89%
  • Chiroptera 84%
  • Nutrition 82%
  146 Citations (Scopus)

  124 Downloads (Pure)