Kristine Bohmann

2019

Promises and pitfalls of using high-throughput sequencing for diet analysis

Alberdi, A., Aizpurua, O., Bohmann, K., Gopalakrishnan, S., Lynggaard, C., Nielsen, M. & Gilbert, M. T. P., mar. 2019, I: Molecular Ecology Resources. 19, 2, s. 327-348

Publikation: Bidrag til tidsskrift › Review › peer review

43 Citationer (Scopus)

Skmer: assembly-free and alignment-free sample identification using genome skims

Sarmashghi, S., Bohmann, K., Gilbert, M. T. P., Bafna, V. & Mirarab, S., 13 feb. 2019, I: Genome Biology. 20

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

17 Citationer (Scopus)

22 Downloads (Pure)

Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North Borneo

Drinkwater, R., Schnell, I. B., Bohmann, K., Bernard, H., Veron, G., Clare, E., Gilbert, M. T. P. & Rossiter, S. J., jan. 2019, I: Molecular Ecology Resources. 19, 1, s. 105-117

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

12 Citationer (Scopus)

32 Downloads (Pure)

2018

Assembly-free and alignment-free sample identification using genome skims

Sarmashghi, S., Bohmann, K., Gilbert, M. T. P., Bafna, V. & Mirarab, S., 1 jan. 2018, I: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10812, s. 276-277 2 s.

Publikation: Bidrag til tidsskrift › Konferenceabstrakt i tidsskrift › Forskning › peer review

Debugging diversity – a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool

Schnell, I. B., Bohmann, K., Schultze, S. E., Richter, S. R., Murray, D. C., Sinding, M. H. S., Bass, D., Cadle, J. E., Campbell, M. J., Dolch, R., Edwards, D. P., Gray, T. N. E., Hansen, T., Hoa, A. N. Q., Noer, C. L., Heise-Pavlov, S., Sander Pedersen, A. F., Ramamonjisoa, J. C., Siddall, M. E. & Tilker, A. & 7 flere, Traeholt, C., Wilkinson, N., Woodcock, P., Yu, D. W., Bertelsen, M. F., Bunce, M. & Gilbert, M. T. P., 2018, I: Molecular Ecology Resources. 18, 6, s. 1282-1298 17 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

22 Citationer (Scopus)

Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K. & Carmona Baez, A. & 9 flere, Arias, C. F., Liu, S., Greenwood, A. D., Bertelsen, M. F., White, N. E., Bunce, M., Zhang, G., Sicheritz-Ponten, T. & Gilbert, T., 1 apr. 2018, I: Nature Ecology & Evolution. 2, 4, s. 659-668 10 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

47 Citationer (Scopus)

138 Downloads (Pure)

Scrutinizing key steps for reliable metabarcoding of environmental samples

Alberdi, A., Aizpurua, O., Gilbert, M. T. P. & Bohmann, K., jan. 2018, I: Methods in Ecology and Evolution. 9, Special feature, s. 134-147 14 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

172 Citationer (Scopus)

Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure

Bohmann, K., Gopalakrishnan, S., Nielsen, M., Nielsen, L. D. S. B., Jones, G., Streicker, D. G. & Gilbert, T., sep. 2018, I: Molecular Ecology Resources. 18, 5, s. 1050-1063 14 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

28 Citationer (Scopus)

168 Downloads (Pure)

2017

Connecting Earth observation to high-throughput biodiversity data

Bush, A., Sollmann, R., Wilting, A., Bohmann, K., Cole, B., Balzter, H., Martius, C., Zlinszky, A., Calvignac-Spencer, S., Cobbold, C. A., Dawson, T. P., Emerson, B. C., Ferrier, S., Gilbert, T., Herold, M., Jones, L., Leendertz, F. H., Matthews, L., Millington, J. D. A. & Olson, J. R. & 11 flere, Ovaskainen, O., Raffaelli, D., Reeve, R., Rödel, M.-O., Rodgers, T. W., Snape, S., Visseren-Hamakers, I., Vogler, A. P., White, P. C. L., Wooster, M. J. & Yu, D. W., 22 jun. 2017, I: Nature Ecology and Evolution. 1, 7, 0176.

Publikation: Bidrag til tidsskrift › Review › peer review

88 Citationer (Scopus)

Diet determined by next generation sequencing reveals pest consumption and opportunistic foraging by bats in macadamia orchards in South Africa

Taylor, P. J., Matamba, E., Steyn, J. N., Nangammbi, T., Zepeda Mendoza, M. L. & Bohmann, K., dec. 2017, I: Acta Chiropterologica. 19, 2, s. 239-254 16 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

15 Citationer (Scopus)

2016

DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses

Zepeda Mendoza, M. L., Bohmann, K., Baez, A. C. & Gilbert, T., 2016, I: BMC Research Notes. 9, 13 s., 255.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

26 Citationer (Scopus)

88 Downloads (Pure)

Do vertebrate gut metagenomes confer rapid ecological adaptation?

Alberdi, A., Aizpurua, O., Bohmann, K., Zepeda Mendoza, M. L. & Gilbert, T., 1 sep. 2016, I: Trends in Ecology & Evolution. 31, 9, s. 689-699 11 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

79 Citationer (Scopus)

First record of Vespertilio murinus from the Arabian Peninsula

Monadjem, A., Joubert, C., Richards, L., Nielsen, I. B., Nielsen, M., Kjartansdóttir, K. R., Bohmann, K., Mourier, T. & Hansen, A. J., 2016, I: Vespertilio. 18, s. 79-89 11 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

2015

Ancient and modern environmental DNA

Pedersen, M. W., Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, J. S., Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, K., Cappellini, E., Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M. T. P., Hansen, A. J., Orlando, L. A. A. & Willerslev, E., 19 jan. 2015, I: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 s., 20130383.

Publikation: Bidrag til tidsskrift › Review › peer review

148 Citationer (Scopus)

Bats, Blood-Feeders and Biodiversity: Illumina Metabarcoding in Dietary Studies

Bohmann, K., 2015, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen. 320 s.

Publikation: Bog/antologi/afhandling/rapport › Ph.d.-afhandling

Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

Schnell, I. B., Bohmann, K. & Gilbert, M. T. P., nov. 2015, I: Molecular Ecology Resources. 15, 6, s. 1289-1303 15 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

202 Citationer (Scopus)

2014

Environmental DNA for wildlife biology and biodiversity monitoring

Bohmann, K., Evans, A., Gilbert, M. T. P., Carvalho, G. R., Creer, S., Knapp, M., Yu, D. W. & de Bruyn, M., 2014, I: Trends in Ecology & Evolution. 29, 6, s. 358-367 10 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

488 Citationer (Scopus)

Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter

Hope, P. R., Bohmann, K., Gilbert, M. T. P., Zepeda Mendoza, M. L., Razgour, O. & Jones, G., 9 maj 2014, I: Frontiers in Zoology. 11, 15 s., 39.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

52 Citationer (Scopus)

2857 Downloads (Pure)

2013

17 Citationer (Scopus)

2012

Challenges & rewards of African research: Do insect-eating bats patrol sugarcane fields in Swaziland

Bohmann, K. & Noer, C. L., 2012, I: Bats. 30, 1, s. 2-5 4 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Formidling

Molossid bats in an African agro-ecosystem select sugarcane fields as foraging habitat

Noer, C. L., Dabelsteen, T., Bohmann, K. & Monadjem, A., apr. 2012, I: African Zoology. 47, 1, s. 1-11 11 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

25 Citationer (Scopus)

2011

Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing

Bidragets oversatte titel: Molecular Diet Analysis of Two African Free-Tailed Bats (Molossidae) Using High Throughput SequencingBohmann, K., Monadjem, A., Noer, C. L., Rasmussen, M., Zeale, M. R. K., Clare, E., Jones, G., Willerslev, E. & Gilbert, M. T. P., 2011, I: PLoS ONE. 6, 6, s. e21441 11 s.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

146 Citationer (Scopus)

124 Downloads (Pure)

Kristine Bohmann

Promises and pitfalls of using high-throughput sequencing for diet analysis

Skmer: assembly-free and alignment-free sample identification using genome skims

Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North Borneo

Assembly-free and alignment-free sample identification using genome skims

Debugging diversity – a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool

Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

Scrutinizing key steps for reliable metabarcoding of environmental samples

Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure

Connecting Earth observation to high-throughput biodiversity data

Diet determined by next generation sequencing reveals pest consumption and opportunistic foraging by bats in macadamia orchards in South Africa

DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses

Do vertebrate gut metagenomes confer rapid ecological adaptation?

First record of Vespertilio murinus from the Arabian Peninsula

Ancient and modern environmental DNA

Bats, Blood-Feeders and Biodiversity: Illumina Metabarcoding in Dietary Studies

Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

Environmental DNA for wildlife biology and biodiversity monitoring

Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter

DNA detective work to solve riddles of conservation

Hunting leeches in the dense forests of Madagascar

When bugs reveal biodiversity

Challenges & rewards of African research: Do insect-eating bats patrol sugarcane fields in Swaziland

Molossid bats in an African agro-ecosystem select sugarcane fields as foraging habitat

Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing

Kristine Bohmann

Publikation

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