Uranyl photoprobing of conformational changes in DNA induced by drug binding

Abstract

The effect on DNA conformation upon binding of the bis-intercalator, N,N'-diacridinyl spermidine is studied by uranyl mediated DNA photocleavage and gel retardation. It is shown that a characteristic A-tract correlated 10 base pair modulation of the uranyl photocleavage of bent (kinetoplast) DNA is suppressed upon binding of the diacridine. Likewise, the anomalous slow gel electrophoretic migration of bent-DNA is abolished by diacridine binding. At higher diacridine/DNA ratios a DNA conformation in which G-residues become hypersensitive to uranyl photocleavage is induced.

Original languageEnglish
JournalAnti-Cancer Drug Design
Volume5
Issue number1
Pages (from-to)105-10
Number of pages6
ISSN0266-9536
Publication statusPublished - Feb 1990

Keywords

  • DNA/analysis
  • DNA Probes/pharmacology
  • DNA, Circular/analysis
  • DNA, Kinetoplast
  • Electrophoresis, Polyacrylamide Gel
  • In Vitro Techniques
  • Nucleic Acid Conformation/drug effects
  • Photochemistry

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