Strand displacement recognition of mixed adenine-cytosine sequences in double stranded DNA by thymine-guanine PNA (peptide nucleic acid)

Abstract

Mixed pyrimidine-purine peptide nucleic acids (PNAs) composed of thymines and guanines are shown to form a PNA(2)-DNA triplex with Watson-Crick complementary adenine-cytosine oligonucleotides and to bind complementary adenine-cytosine targets in double stranded DNA by helix invasion. These results for the first time demonstrate binding of an unmodified PNA oligomer to a mixed pyrimidine-purine target in double stranded DNA and illustrate a novel binding mode of PNA.

Original languageEnglish
JournalBioorganic & Medicinal Chemistry
Volume9
Issue number9
Pages (from-to)2429-34
Number of pages6
ISSN0968-0896
Publication statusPublished - Sept 2001

Keywords

  • Base Composition
  • Base Pairing
  • DNA/chemistry
  • Dinucleoside Phosphates/metabolism
  • Guanine
  • Hydrogen Bonding
  • Nucleic Acid Denaturation
  • Peptide Nucleic Acids/chemistry
  • Temperature
  • Thymine

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