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Fast pairwise structural RNA alignments by pruning of the dynamical programming matrix
Jakob Hull Havgaard
, Elfar Torarinsson,
Jan Gorodkin
88
Citations (Scopus)
1140
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Dive into the research topics of 'Fast pairwise structural RNA alignments by pruning of the dynamical programming matrix'. Together they form a unique fingerprint.
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Keyphrases
Pruning
100%
Dynamical Programming
100%
Pre-folding
50%
Memory Requirements
50%
Local Alignment
25%
Length-dependent
25%
Global Alignment
25%
Energy Model
25%
Computational Heuristics
25%
User-friendly Tool
25%
Branch Point
25%
Time Requirement
25%
Computational Complexity
25%
Computer Science
Memory Requirement
100%
Time Requirement
50%
Computational Complexity
50%
Computational Method
50%
Local Alignment
50%
Engineering
Memory Requirement
100%
Computational Complexity
50%
Main Problem
50%
Branch Point
50%
Earth and Planetary Sciences
Pruning
100%
Computational Method
25%
Biochemistry, Genetics and Molecular Biology
Heuristics
100%