Comparative ncRNA gene and structure prediction using Foldalign and FoldalignM

Jakob Hull Havgaard; Simranjeet Kaur; Jan Gorodkin

doi:10.1002/0471250953.bi1211s39

Comparative ncRNA gene and structure prediction using Foldalign and FoldalignM

Jakob Hull Havgaard, Simranjeet Kaur, Jan Gorodkin

5 Citations (Scopus)

Abstract

This unit describes how to use Foldalign and FoldalignM to make structural alignments of non-protein-coding-RNA (ncRNA). These tools can be used to find new ncRNAs, to find the structure of novel ncRNAs, and to improve alignments for known ncRNAs.

Original language	English
Journal	Current Protocols in Bioinformatics
Volume	39
Pages (from-to)	12.11.1-12.11.15
Number of pages	5
ISSN	1934-3396
DOIs	https://doi.org/10.1002/0471250953.bi1211s39
Publication status	Published - Sept 2012

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title = "Comparative ncRNA gene and structure prediction using Foldalign and FoldalignM",

abstract = "This unit describes how to use Foldalign and FoldalignM to make structural alignments of non-protein-coding-RNA (ncRNA). These tools can be used to find new ncRNAs, to find the structure of novel ncRNAs, and to improve alignments for known ncRNAs.",

author = "Havgaard, {Jakob Hull} and Simranjeet Kaur and Jan Gorodkin",

year = "2012",

month = sep,

doi = "10.1002/0471250953.bi1211s39",

language = "English",

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journal = "Current Protocols in Bioinformatics",

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T1 - Comparative ncRNA gene and structure prediction using Foldalign and FoldalignM

AU - Havgaard, Jakob Hull

AU - Kaur, Simranjeet

AU - Gorodkin, Jan

PY - 2012/9

Y1 - 2012/9

N2 - This unit describes how to use Foldalign and FoldalignM to make structural alignments of non-protein-coding-RNA (ncRNA). These tools can be used to find new ncRNAs, to find the structure of novel ncRNAs, and to improve alignments for known ncRNAs.

AB - This unit describes how to use Foldalign and FoldalignM to make structural alignments of non-protein-coding-RNA (ncRNA). These tools can be used to find new ncRNAs, to find the structure of novel ncRNAs, and to improve alignments for known ncRNAs.

U2 - 10.1002/0471250953.bi1211s39

DO - 10.1002/0471250953.bi1211s39

M3 - Journal article

C2 - 22948726

SN - 1934-3396

VL - 39

SP - 12.11.1-12.11.15

JO - Current Protocols in Bioinformatics

JF - Current Protocols in Bioinformatics

ER -

Comparative ncRNA gene and structure prediction using Foldalign and FoldalignM

Abstract

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