Research output per year
Research output per year
Personal profile
Short presentation
I am a molecular and cellular biologist with a long experience in non-coding RNAs (in particular microRNAs). My main interest is about computational biology. Currently, I am a member of the Brunak lab at the NNF Center for Protein Research, University of Copenhagen and I'm also an affiliated member of the Computational Biology Lab at the Danish Cancer Society in Papaleo lab. I am working on data integration of omics data, electronic patients records, analysis of laboratory tests and drug effects in cancer patients.
I am also interested in non-invasive biomarkers. In 2012 I designed and developed the miRandola database (http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0047786), the first extracellular circulating microRNA database.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Education/Academic qualification
miRandola: extracellular circulating microRNAs database, University of Catania
28 Nov 2010 → 28 Nov 2012
Award Date: 28 Nov 2012
External positions
University of Pisa
1 Nov 2013 → 1 Jul 2016
National Research Council of Italy
4 Jun 2013 → 1 Jul 2016
Keywords
- ???Bioinformatik???
- Computational biology
- Bioinformatics, high throughtput sequencing data analysis
- data integration
- Cancer
- network biology
- microRNA
- Non-coding RNAs
- Database
- Systems Biology
Fingerprint
Dive into the research topics where Francesco Russo is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 6 Similar Profiles
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Combing the Hairball: Improving Visualization of miRNA-Target Interaction Networks
Russo, F., Hu, J. X., Romero Herrera, J. A. & Brunak, S., 2019, MicroRNA Target Identification: Methods and Protocols. Laganà, A. (ed.). Humana Press, p. 279-289 11 p. (Methods in Molecular Biology, Vol. 1970).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Comorbidity landscape of the Danish patient population affected by chromosome abnormalities
Jørgensen, I. F., Russo, F., Jensen, A. B., Westergaard, D., Lademann, M., Hu, J. X., Brunak, S. & Belling, K., 1 Nov 2019, In: Genetics In Medicine. 21, 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Identification of Disease-miRNA Networks Across Different Cancer Types Using SWIM
Fiscon, G., Conte, F., Farina, L., Pellegrini, M., Russo, F. & Paci, P., 2019, MicroRNA Target Identification: Methods and Protocols. Laganà, A. (ed.). Humana Press, p. 169-181 13 p. (Methods in Molecular Biology, Vol. 1970).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Identification of hyper-rewired genomic stress non-oncogene addiction genes across 15 cancer types
Hjaltelin, J. X., Izarzugaza, J. M. G., Jensen, L. J., Russo, F., Westergaard, D. & Brunak, S., 1 Dec 2019, In: npj Systems Biology and Applications. 5, 10 p., 27.Research output: Contribution to journal › Journal article › Research › peer-review
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Comorbidity landscape of the Danish patient population affected by chromosomal abnormalities
Russo, F., Jørgensen, I. F., Westergaard, D., Jensen, A. B., Hu, J. X., Belling, K. & Brunak, S., 2018, In: European Journal of Human Genetics. 26, p. 697-698Research output: Contribution to journal › Conference abstract in journal › Research
14 Citations (Scopus) -
Interplay Between Long Noncoding RNAs and MicroRNAs in Cancer
Russo, F., Fiscon, G., Conte, F., Rizzo, M., Paci, P. & Pellegrini, M., 2018, Computational Cell Biology. von Stechow, L. & Delgado, A. S. (eds.). Humana Press, p. 75-92 18 p. (Methods in Molecular Biology, Vol. 1819).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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miRandola 2017: a curated knowledge base of non-invasive biomarkers
Russo, F., Di Bella, S., Vannini, F., Berti, G., Scoyni, F., Cook, H. V., Santos, A., Nigita, G., Bonnici, V., Laganà, A., Geraci, F., Pulvirenti, A., Giugno, R., De Masi, F., Belling, K., Jensen, L. J., Brunak, S., Pellegrini, M. & Ferro, A., 1 Jan 2018, In: Nucleic Acids Research. 46, D1, p. D354-D359 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The Interplay of Non-coding RNAs and X Chromosome Inactivation in Human Disease
Russo, F., De Masi, F., Brunak, S. & Belling, K. G., 2018, Systems Biology. Rajewsky, N., Jurga, S. & Barciszewski, J. (eds.). Springer, p. 229-238 (RNA Technologies).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review