Research output per year
Research output per year
Search results
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2019
Genetic affinities of an eradicated European Plasmodium falciparum strain
de-Dios, T., van Dorp, L., Gelabert, P., Carøe, C., Sandoval Velasco, M., Fregel, R., Escosa, R., Aranda, C., Huijben, S., Balloux, F., Gilbert, M. T. P. & Lalueza-Fox, C., 2019, In: Microbial Genomics. 5, 9, 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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MobiSeq: De novo SNP discovery in model and non-model species through sequencing the flanking region of transposable elements
Rey-Iglesia, A., Gopalakrishan, S., Carøe, C., Alquezar-Planas, D. E., Ahlmann Nielsen, A., Röder, T., Pedersen, L. B., Næsborg-Nielsen, C., Sinding, M.-H. S., Rath, M. F., Li, Z., Petersen, B., Gilbert, M. T. P., Bunce, M., Mourier, T. & Hansen, A. J., Mar 2019, In: Molecular Ecology Resources. 19, 2, p. 512-525 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must
Siren, K., Mak, S. S. T., Melkonian, C., Caroe, C., Swiegers, J. H., Molenaar, D., Fischer, U. & Gilbert, M. T. P., 9 Apr 2019, In: Frontiers in Microbiology. 10, 17 p., 697.Research output: Contribution to journal › Journal article › Research › peer-review
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2018
Ancient DNA analysis of Scandinavian medieval drinking horns and the horn of the last aurochs bull
Bro-Jørgensen, M. H., Carøe, C., Vieira, F. G., Nestor, S., Hallström, A., Gregersen, K. M., Etting, V., Gilbert, M. T. P. & Sinding, M. H. S., 1 Nov 2018, In: Journal of Archaeological Science. 99, p. 47-54 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Interspecific Gene Flow Shaped the Evolution of the Genus Canis
Gopalakrishnan, S., Sinding, M. H. S., Ramos-Madrigal, J., Niemann, J., Samaniego Castruita, J. A., Vieira, F. G., Carøe, C., Montero, M. D. M., Kuderna, L., Serres, A., González-Basallote, V. M., Liu, Y. H., Wang, G. D., Marques-Bonet, T., Mirarab, S., Fernandes, C., Gaubert, P., Koepfli, K. P., Budd, J. & Rueness, E. K. & 7 others, , 5 Nov 2018, In: Current Biology. 28, 21, p. 3441-3449Research output: Contribution to journal › Journal article › Research › peer-review
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Single-tube library preparation for degraded DNA
Carøe, C., Gopalakrishnan, S., Vinner, L., Mak, S. S. T., Sinding, M. H. S., Samaniego, J. A., Wales, N., Sicheritz-Ponten, T. & Gilbert, M. T. P., 1 Feb 2018, In: Methods in Ecology and Evolution. 9, 2, p. 410-419 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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2017
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
Mak, S., Gopalakrishnan, S., Carøe, C., Geng, C., Liu, S., Sinding, M. H. S., Kuderna, L. F. K., Zhang, W., Fu, S., Garrett Vieira, F. J., Germonpré, M., Bocherens, H., Fedorov, S., Petersen, B., Sicheritz-Pontén, T., Marques-Bonet, T., Zhang, G., Jiang, H. & Gilbert, T., 1 Aug 2017, In: GigaScience. 6, 8, p. 1–13 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Draft genome of the fungus-growing termite pathogenic fungus Ophiocordyceps bispora (Ophiocordycipitaceae, Hypocreales, Ascomycota)
Conlon, B. H., Mitchell, J., de Beer, Z. W., Carøe, C., Gilbert, T., Eilenberg, J., Thomas-Poulsen, M. & de Fine Licht, H. H., 1 Apr 2017, In: Data in Brief. 11, p. 537-542 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
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2016
The limits and potential of paleogenomic techniques for reconstructing grapevine domestication
Wales, N., Ramos Madrigal, J., Cappellini, E., Baez, A. C., Samaniego Castruita, J. A., Romero-Navarro, J. A., Carøe, C., Avila Arcos, M. D. C., Peñaloza, F., Moreno Mayar, J. V., Gasparyan, B., Zardaryan, D., Bagoyan, T., Smith, A., Pinhasi, R., Bosi, G., Fiorentino, G., Grasso, A. M., Celant, A. & Bar-Oz, G. & 7 others, , Aug 2016, In: Journal of Archaeological Science. 72, p. 57-70 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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2015
Ancient and modern environmental DNA
Pedersen, M. W., Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, J. S., Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, K., Cappellini, E., Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M. T. P., Hansen, A. J., Orlando, L. A. A. & Willerslev, E., 19 Jan 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 p., 20130383.Research output: Contribution to journal › Review › peer-review
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Meta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance
Nordahl Petersen, T., Rasmussen, S., Hasman, H., Carøe, C., Bælum, J., Schultz, A. C., Bergmark, L., Svendsen, C. A., Lund, O., Sicheritz-Pontén, T. & Aarestrup, F. M., 10 Jul 2015, In: Scientific Reports. 5, p. 11444Research output: Contribution to journal › Journal article › Research › peer-review
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New insights on single-stranded versus double-stranded DNA library preparation for ancient DNA
Wales, N., Carøe, C., Sandoval Velasco, M., Gamba, C., Barnett, R., Samaniego Castruita, J. A., Ramos Madrigal, J., Orlando, L. A. A. & Gilbert, M. T. P., Dec 2015, In: BioTechniques. 59, 6, p. 368-371 4 p.Research output: Contribution to journal › Letter › peer-review
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The origin and evolution of maize in the Southwestern United States
Rodrigues da Fonseca, R. A., Smith, B. D., Wales, N., Cappellini, E., Skoglund, P., Fumagalli, M., Samaniego Castruita, J. A., Carøe, C., Avila Arcos, M. D. C., Hufnagel, D. E., Korneliussen, T. S., Garrett Vieira, F. J., Jakobsson, M., Arriaza, B., Willerslev, E., Nielsen, R., Hufford, M. B., Albrechtsen, A., Ross-Ibarra, J. & Gilbert, M. T. P., 8 Jan 2015, In: Nature Plants. 1, 5 p., 14003.Research output: Contribution to journal › Letter › peer-review