Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms

Daniel I. Speiser, M. Sabrina Pankey, Alexander K. Zaharoff, Barbara A. Battelle, Heather D. Bracken-Grissom, Jesse W. Breinholt, Seth M. Bybee, Thomas W. Cronin, Anders Lydik Garm, Annie R. Lindgren, Nipam H. Patel, Megan L. Porter, Meredith E. Protas, Ajna S. Rivera, Jeanne M. Serb, Kirk S. Zigler, Keith A. Crandall, Todd H. Oakley

43 Citations (Scopus)
333 Downloads (Pure)
Original languageEnglish
Article number350
JournalB M C Bioinformatics
Volume15
Number of pages12
ISSN1471-2105
DOIs
Publication statusPublished - 19 Nov 2014

Keywords

  • Bioinformatics
  • Eyes
  • Evolution
  • Galaxy
  • Next-generation sequence analysis
  • Orthology
  • Phototransduction
  • Transcriptomes
  • Vision

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