PNA hybridizes to complementary oligonucleotides obeying the Watson-Crick hydrogen-bonding rules

O Buchardt, S M Freier, D A Driver, S K Kim, B Norden, Peter E. Nielsen

Abstract

DNA analogues are currently being intensely investigated owing to their potential as gene-targeted drugs. Furthermore, their properties and interaction with DNA and RNA could provide a better understanding of the structural features of natural DNA that determine its unique chemical, biological and genetic properties. We recently designed a DNA analogue, PNA, in which the backbone is structurally homomorphous with the deoxyribose backbone and consists of N-(2-aminoethyl)glycine units to which the nucleobases are attached. We showed that PNA oligomers containing solely thymine and cytosine can hybridize to complementary oligonucleotides, presumably by forming Watson-Crick-Hoogsteen (PNA)2-DNA triplexes, which are much more stable than the corresponding DNA-DNA duplexes, and bind to double-stranded DNA by strand displacement. We report here that PNA containing all four natural nucleobases hybridizes to complementary oligonucleotides obeying the Watson-Crick base-pairing rules, and thus is a true DNA mimic in terms of base-pair recognition.

Original languageEnglish
JournalNature
Volume365
Issue number6446
Pages (from-to)566-8
Number of pages3
ISSN0028-0836
DOIs
Publication statusPublished - 7 Oct 1993

Keywords

  • Base Sequence
  • Cytosine/chemistry
  • DNA/chemistry
  • Glycine/analogs & derivatives
  • Hydrogen Bonding
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Oligodeoxyribonucleotides/chemistry
  • RNA/chemistry
  • Thermodynamics
  • Thymine/chemistry

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