Sine Lo Svenningsen

Research output

Research output per year 2003 2008 2011 2015 2017 2018 2019

• 23 Journal article
• 3 Book chapter
• 1 Review

Research output per year

Research output per year

Search results

• 2019

  Big Impact of the Tiny: Bacteriophage–Bacteria Interactions in Biofilms

  Hansen, M. F., Svenningsen, S. L., Røder, H. L., Middelboe, M. & Burmølle, M., Sept 2019, In: Trends in Microbiology. 27, 9, p. 739-752 14 p.

  Research output: Contribution to journal › Review › peer-review

  • Biofilms 100%
  • Bacteriophages 86%
  • Phage Therapy 22%
  • Ecology 17%
  • Infections 13%
  24 Citations (Scopus)

• Phage defense mechanisms and their genomic and phenotypic implications in the fish pathogen Vibrio anguillarum

  Castillo, D., Rørbo, N., Jørgensen, J., Lange, J., Tan, D., Kalatzis, P. G., Lo Svenningsen, S. & Middelboe, M., 1 Mar 2019, In: FEMS Microbiology Ecology. 95, 3, fiz004.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Vibrio 100%
  • Bacteriophages 77%
  • Fishes 71%
  • Virus Receptors 19%
  • Virulence 12%
  15 Citations (Scopus)
• 2018

  Prevalent reliance of bacterioplankton on exogenous vitamin B1 and precursor availability

  Paerl, R. W., Sundh, J., Tan, D., Svenningsen, S. L., Hylander, S., Pinhassi, J., Andersson, A. F. & Riemann, L., 30 Oct 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 44, p. E10447-E10456

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Provitamins 100%
  • Metagenome 89%
  • Thiamine 76%
  • pyrimidine 38%
  • Nutrients 26%
  14 Citations (Scopus)

• Small RNA-Based Regulation of Bacterial Quorum Sensing and Biofilm Formation

  Svenningsen, S. L., 1 Jul 2018, In: Microbiology Spectrum. 6, 4, 21 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Quorum Sensing 100%
  • quorum sensing 95%
  • RNA 81%
  • biofilm 80%
  • Biofilms 77%
  11 Citations (Scopus)

• Transfer RNA instability as a stress response in Escherichia coli: rapid dynamics of the tRNA pool as a function of demand

  Sørensen, M. A., Fehler, A. O. & Svenningsen, S. L., 4 May 2018, In: RNA Biology. 15, 4/5, p. 586-593 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • RNA Stability 100%
  • Transfer RNA 99%
  • Escherichia coli 63%
  • DNA-Directed RNA Polymerases 20%
  • Starvation 19%
  12 Citations (Scopus)

  62 Downloads (Pure)
• 2017

  A growing microcolony can survive and support persistent propagation of virulent phages

  Eriksen, R. S., Svenningsen, S. L., Sneppen, K. & Mitarai, N., 9 Jan 2017, In: Proceedings of the National Academy of Sciences USA (PNAS). 115, 2, p. 337-342

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Bacteriophages 100%
  • Bacteria 68%
  • Bacteriophage P1 32%
  • Extracellular Polymeric Substance Matrix 28%
  • Quorum Sensing 25%
  18 Citations (Scopus)

• In silico evolution of lysis-lysogeny strategies reproduces observed lysogeny propensities in temperate bacteriophages

  Sinha, V., Goyal, A., Svenningsen, S. L., Semsey, S. & Krishna, S., 26 Jul 2017, In: Frontiers in Microbiology. 8, 11 p., 1386.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Lysogeny 100%
  • Bacteriophages 61%
  • Infections 17%
  • Planets 7%
  • Pressure 6%
  10 Citations (Scopus)

  56 Downloads (Pure)

• Quantification of the abundance and charging levels of transfer RNAs in Escherichia coli

  Stenum, T. S., Sørensen, M. A. & Svenningsen, S. L., 22 Aug 2017, In: Journal of Visualized Experiments. 126, e56212.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Transfer RNA 100%
  • Transfer RNA Aminoacylation 96%
  • Escherichia coli 76%
  • RNA 22%
  • Northern Blotting 12%
  6 Citations (Scopus)

• Transfer RNA is highly unstable during early amino acid starvation in Escherichia coli

  Svenningsen, S. L., Kongstad, M., Stenum, T. S., Muñoz Gomez, A. J. & Sørensen, M. A., 1 Jan 2017, In: Nucleic Acids Research. 45, 2, p. 793-804 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Transfer RNA 100%
  • Starvation 98%
  • Escherichia coli 64%
  • Amino Acids 64%
  • Amino Acid-Specific Transfer RNA 15%
  31 Citations (Scopus)

  76 Downloads (Pure)
• 2015

  Effects of Four Different Regulatory Mechanisms on the Dynamics of Gene Regulatory Cascades

  Hansen, S., Krishna, S., Semsey, S. & Lo Svenningsen, S., 17 Jul 2015, In: Scientific Reports. 5, 12186.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • gene 100%
  • dynamic response 49%
  • effect 30%
  • repression 30%
  1 Citation (Scopus)

  62 Downloads (Pure)

• How long can bacteriophage λ change its mind?

  Semsey, S., Campion, C., Mohamed, A. & Svenningsen, S. L., 16 Oct 2015, In: Bacteriophage. 5, 1, p. e1012930

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Lysogeny 100%
  • Bacteriophages 91%
  • DNA Replication 31%
  • DNA 17%
  • Infections 14%

• Quorum sensing determines the choice of antiphage defense strategy in Vibrio anguillarum

  Tan, D., Svenningsen, S. L. & Middelboe, M., 16 Jun 2015, In: mBio. 6, 3, 10 p., e00627-15.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Vibrio 100%
  • Quorum Sensing 98%
  • Bacteriophages 77%
  • Defense Mechanisms 32%
  • Fishes 11%
  51 Citations (Scopus)

  119 Downloads (Pure)
• 2014

  Commitment to lysogeny is preceded by a prolonged period of sensitivity to the late lytic regulator Q in bacteriophage Λ

  Svenningsen, S. L. & Semsey, S., 2014, In: Journal of Bacteriology. 196, 20, p. 3582-3588 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Lysogeny 100%
  • Bacteriophages 61%
  • Prophages 28%
  • Chromosomes 24%
  • Plasmids 16%
  9 Citations (Scopus)
• 2013

  A quorum-sensing-induced bacteriophage defense mechanism

  Høyland-Kroghsbo, N. M., Mærkedahl, R. B. & Svenningsen, S., 2013, In: mBio. 4, 1, p. 1-9 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Quorum Sensing 100%
  • Bacteriophages 78%
  • Bacteria 24%
  • Population Density 16%
  • Adsorption 15%
  100 Citations (Scopus)
• 2011

  Direct and indirect effects in the regulation of overlapping promoters

  Bendtsen, K. M., Erdossy, J., Csiszovski, Z., Svenningsen, S. L., Sneppen, K., Krishna, S. & Semsey, S., Sept 2011, In: Nucleic Acids Research. 39, 16, p. 6879-6885 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • DNA-Binding Proteins 100%
  • Nucleic Acid Regulatory Sequences 34%
  • DNA-Directed RNA Polymerases 33%
  • Gene Expression Regulation 32%
  • Genetic Promoter Regions 28%
  22 Citations (Scopus)

  2271 Downloads (Pure)

• Small RNA target genes and regulatory connections in the Vibrio cholerae quorum sensing system

  Hammer, B. K. & Svenningsen, S. L., 2011, Quorum sensing: Methods and protocols. Rumbaugh, K. P. (ed.). Humana Press, Vol. 692. p. 189-206 18 p. (Methods in Molecular Biology).

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  • Quorum Sensing 100%
  • Vibrio cholerae 99%
  • Regulator Genes 82%
  • RNA 55%
  • Vibrio 50%
  1 Citation (Scopus)

• The functional half-life of an mRNA depends on the ribosome spacing in an early coding region

  Pedersen, M., Nissen, S., Mitarai, N., Lo Svenningsen, S., Sneppen, K. & Pedersen, S., 18 Mar 2011, In: Journal of Molecular Biology. 407, 1, p. 35-44 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Ribosomes 100%
  • Half-Life 85%
  • Messenger RNA 54%
  • Codon 47%
  • RNA Stability 8%
  20 Citations (Scopus)

  1534 Downloads (Pure)
• 2010

  Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi qourum-sensing response

  Tu, K. C., Long, T., Svenningsen, S. L., Wingreen, N. S. & Bassler, B. L., 26 Feb 2010, In: Molecular Cell. 37, 4, p. 567-579 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Vibrio 100%
  • Quorum Sensing 78%
  • RNA 54%
  • Cell Count 46%
  • Population Density 18%
  93 Citations (Scopus)

  560 Downloads (Pure)
• 2009

  Gene dosage compensation calibrates four regulatory RNAs to control Vibrio cholerae quorum sensing

  Svenningsen, S. L., Tu, K. C. & Bassler, B. L., 2009, In: EMBO Journal. 28, 4, p. 429-39 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Genetic Dosage Compensation 100%
  • Quorum Sensing 67%
  • Vibrio cholerae 66%
  • Signal Transduction 57%
  • Communication 48%
  80 Citations (Scopus)
• 2008

  A negative feedback loop involving small RNAs accelerates Vibrio cholerae'stransition out of quorum-sensing mode

  Svenningsen, S. L., 2008, In: Genes & Development. 22, 2, p. 226-38 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Quorum Sensing 100%
  • Vibrio cholerae 99%
  • Population Density 76%
  • Cell Count 59%
  • RNA 55%

• A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode

  Svenningsen, S. L., Waters, C. M. & Bassler, B. L., 2008, In: Genes and Development. 22, 2, p. 226-238 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Quorum Sensing 100%
  • Vibrio cholerae 99%
  • Population Density 68%
  • Cell Count 59%
  • RNA 55%
  90 Citations (Scopus)

  2 Downloads (Pure)

• A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics inVibrio harveyi

  Svenningsen, S. L., 2008, In: Molecular Microbiology. 70, 4, p. 896-907 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  508 Downloads (Pure)

• A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics in Vibrio harveyi

  Tu, K. C., Waters, C. M., Svenningsen, S. L. & Bassler, B. L., 2008, In: Molecular Microbiology. 70, 4, p. 896-907 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Vibrio 100%
  • Quorum Sensing 98%
  • RNA 54%
  • Cell Count 23%
  • Population Density 18%
  63 Citations (Scopus)

  3 Downloads (Pure)

• Small RNA control of cell-to-cell communication in Vibrio harveyi and Vibrio cholerae

  Svenningsen, S. L., 2008, Evolution from Cellular to Social Scales. Skjeltorp, A. T. & Belushkin, A. V. (eds.). Springer Publishing Company, p. 45-61 16 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research

• Small RNA control of cell-to-cell communication in Vibrio harveyi and Vibrio cholerae small RNA control of quorum sensing

  Svenningsen, S. L., 1 Dec 2008, Evolution from Cellular to Social Scales. p. 45-59 15 p. (NATO Science for Peace and Security Series B: Physics and Biophysics).

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  • Vibrio 100%
  • Quorum Sensing 98%
  • Vibrio cholerae 98%
  • Cell Communication 73%
  • RNA 54%
• 2005

  On the role of Cro in lambda prophage induction

  Svenningsen, S. L., Constantino, N., Court, D. L. & Adhya, S., 2005, In: Proceedings of the National Academy of Science of the United States of America. 102, 12, p. 4465-4469

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Virus Activation 100%
  • Genetic Operator Regions 41%
  • Lysogeny 40%
  • Maintenance 35%
  • Prophages 34%
  72 Citations (Scopus)

  427 Downloads (Pure)
• 2003

  Single-cell Analysis of Lambda Immunity Regulation

  Bæk, K. T., Svenningsen, S. L., Eisen, H., Sneppen, K. & Brown, S., 2003, In: Journal of Molecular Biology. 334, 3, p. 363-372 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  • Single-Cell Analysis 100%
  • Immunity 60%
  • Fluorescence 40%
  • Operon 27%
  • DNA Damage 21%
  39 Citations (Scopus)

  1849 Downloads (Pure)