Faculty of Health and Medical Sciences

Search results

• Introduction to bulk RNAseq analysis: supplementary material

  Romero Herrera, J. A. (Creator), Zschach, H. (Contributor), Terkelsen, T. B. (Contributor), Andrajeva, D. (Contributor) & Kalvisa, A. (Contributor), Zenodo, 2023

  DOI: 10.5281/zenodo.7802718, https://zenodo.org/record/7802718

  Dataset

• Tryps-IN: A streamlined palaeoproteomics workflow enables ZooMS analysis of 10,000-year-old petrous bones from Jordan rift-valley

  Zeitner, J. T. (Creator), Lisa, Y. (Creator), Meillour, L. L. (Creator), Pia, N. W. (Creator), Max, R. (Creator), Mackie, M. (Creator), Pernille, B. (Creator), Moritz, K. (Creator), Ingolf, T. (Creator), Collins, M. J. (Creator) & Taurozzi, A. J. (Creator), Zenodo, 2023

  DOI: 10.5281/zenodo.7861359, https://zenodo.org/records/7861359

  Dataset

• HLA Class II specificity assessed by high-density peptide microarray interactions

  Østerbye, T. (Creator), Nielsen, M. (Creator), Dudek, N. L. (Creator), Ramarathinam, S. H. (Creator), Purcell, A. W. (Creator), Schafer-Nielsen, C. (Creator) & Buus, S. (Creator), Zenodo, 2020

  DOI: 10.5061/dryad.tqjq2bvvv, https://zenodo.org/record/3978922

  Dataset

• MSLibrarian: Spectral Warehouse DBs for some common species

  Isaksson, M. (Creator), Karlsson, C. (Creator), Laurell, T. (Creator), Kirkeby, A. (Creator) & Heusel, M. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.5749924, https://zenodo.org/record/5749924

  Dataset

• Homo sapiens expanded into the Northern European Plains by 45,000 years ago

  Mylopotamitaki, D. (Creator), Weiss, M. (Creator), Fewlass, H. (Creator), Zavala, E. I. (Creator), Rougier, H. (Creator), Sümer, A. P. (Creator), Hajdinjak, M. (Creator), Smith, G. M. (Creator), Ruebens, K. (Creator), Sinet-Mathiot, V. (Creator), Pederzani, S. (Creator), Essel, E. (Creator), Harking, F. S. (Creator), Xia, H. (Creator), Hansen, J. (Creator), Kirchner, A. (Creator), Lauer, T. (Creator), Stahlschmidt, M. (Creator), Hein, M. (Creator), Talamo, S. (Creator), Wacker, L. (Creator), Meller, H. (Creator), Dietl, H. (Creator), Orschiedt, J. (Creator), Olsen, J. V. (Creator), Zeberg, H. (Creator), Prüfer, K. (Creator), Krause, J. (Creator), Meyer, M. (Creator), Welker, F. (Creator), McPherron, S. P. (Creator), Schüler, T. (Creator) & Hublin, J. (Creator), Zenodo, 2023

  DOI: 10.5281/zenodo.8063812, https://zenodo.org/records/8063812

  Dataset

• Hominid Palaeoproteomic Reference Dataset

  Patramanis, I. (Creator), Ramos Madrigal, J. (Creator), Cappellini, E. (Creator) & Racimo, F. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.7695164, https://zenodo.org/record/7695164

  Dataset

• GWAS summary statistics for waist-to-hip ratio and body principal components

  Sulc, J. (Creator), Sonrel, A. (Creator), Mounier, N. (Creator), Auwerx, C. (Creator), Marouli, E. (Creator), Darrous, L. (Creator), Draganski, B. (Creator), Oskari Kilpeläinen, T. (Creator), Joshi, P. (Creator), Loos, R. J. F. (Creator) & Kutalik, Z. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.5171807, https://zenodo.org/record/5171807

  Dataset

• High-throughput characterization of photocrosslinker-bearing ion channel variants to map residues critical for function and pharmacology

  Braun, N. (Creator), Friis, S. (Creator), Ihling, C. (Creator), Sinz, A. (Creator), Andersen, J. (Creator) & Pless, S. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4906985, https://zenodo.org/record/4906985

  Dataset

• Taxometer: Improving taxonomic classification of metagenomics contigs

  Kutuzova, S. (Creator), Nielsen, M. (Creator), Lindez Piera, P. (Creator), Nybo Nissen, J. (Creator) & Rasmussen, S. (Creator), Zenodo, 2024

  DOI: 10.5281/zenodo.13379588, https://zenodo.org/records/13379588

  Dataset

• Plots.jl

  Breloff, T. (Creator), Schwabeneder, D. (Contributor), Borregaard, M. K. (Contributor), Christ, S. (Contributor), Heinen, J. (Contributor), Yuval (Contributor), Palugniok, A. (Contributor), Danisch, S. (Contributor), Vertechi, P. (Contributor), Omarov, Z. (Contributor), Chamberlin, T. (Contributor), @ma-laforge (Contributor), Rackauckas, C. (Contributor), Schulz, O. (Contributor), Pfitzner, S. (Contributor), Arakaki, T. (Contributor), Yahyaabadi, A. (Contributor), Devine, J. (Contributor), Pech, S. (Contributor), Mogensen, P. K. (Contributor), Watson, S. S. (Contributor), Saito, N. (Contributor), Pasquier, B. (Contributor), Bergmann, R. (Contributor), Nowacki, A. (Contributor), Butterworth, I. (Contributor), Gustavsson, D. (Contributor), Singhvi, A. (Contributor), david-macmahon (Contributor), Ekre, F. (Contributor), Saeed, M. B. T. (Contributor), Carlsson, K. (Contributor), Kearney, W. (Contributor), Korsbo, N. (Contributor), Lucas, M. (Contributor), @Godisemo (Contributor), Oswald, F. (Contributor), Zea, D. J. (Contributor), @WillRam (Contributor), Bezrukov, F. (Contributor), Lyon, S. (Contributor), Darakananda, D. (Contributor), Hauertmann, L. (Contributor), Febbo, H. (Contributor), @H-M-H (Contributor), Day, J. (Contributor), @wfgra (Contributor), Olver, S. (Contributor), Ling, J. (Contributor), Liu, J. (Contributor), Axen, S. (Contributor), @o01eg (Contributor), Micluța-Câmpeanu, S. (Contributor), Holy, T. (Contributor), Kelman, T. (Contributor), Levitt, A. (Contributor), Lin, I. (Contributor), Scholes, H. (Contributor), @djsegal (Contributor), Nakerst, G. (Contributor), Hagemann, F. (Contributor), Gomez, M. (Contributor), @biggsbiggsby (Contributor), Anderson, J. (Contributor), Kraus, M. (Contributor), Lucibello, C. (Contributor), Deits, R. (Contributor), Mkhasenko, M. (Contributor), Legat, B. (Contributor), Johnson, S. G. (Contributor), Verzani, J. (Contributor), Fält, M. (Contributor), Karki, R. (Contributor), Piibeleht, M. (Contributor), Vicentini, F. (Contributor), Anthoff, D. (Contributor), Wabeke, L. (Contributor), Kominami, Y. (Contributor), Dowson, O. (Contributor), Max, G. (Contributor), Greimel, F. (Contributor), Jérémy (Contributor), Li, P. (Contributor), Sanders, D. P. (Contributor), Riseth, A. N. (Contributor), Weidner, J. (Contributor), @jakkor2 (Contributor), Zubieta, P. (Contributor), Çakır, H. Y. (Contributor), Rinehart, J. (Contributor), Biel, M. (Contributor), Schauer, M. (Contributor), Giodano, M. (Contributor), @olegshtch (Contributor), Shen, L. (Contributor), Fessler, J. (Contributor), @hustf (Contributor), Dar, A. H. (Contributor), @8uurg (Contributor), Siqueira, A. (Contributor), Dawid, A. (Contributor), Lusiani, A. (Contributor), Mezei, B. (Contributor), Ide, B. (Contributor), Lungwitz, B. (Contributor), Riederer, B. (Contributor), Sinquin, B. (Contributor), Lee, C. (Contributor), Stocker, C. (Contributor), Finkensiep, C. (Contributor), @Cornelius-G (Contributor), Høegh, D. (Contributor), Biasiolli, D. (Contributor), Castel, D. (Contributor), Saba, E. (Contributor), Wang, F. (Contributor), Plas, F. V. D. (Contributor), Carlson, F. B. (Contributor), Smith, G. (Contributor), Ikoma, H. (Contributor), Mehr, H. (Contributor), @InfiniteChai (Contributor), Dunn, J. (Contributor), Bezanson, J. (Contributor), Eldredge, J. (Contributor), Jain, J. (Contributor), Blåbäck, J. (Contributor), @jmert (Contributor), Khatri, L. (Contributor), Siegelmann, L. (Contributor), @marekkukan-tw (Contributor), Werder, M. (Contributor), Grechkin, M. (Contributor), Cawte, M. (Contributor), @milesfrain (Contributor), Bauer, N. (Contributor), Werneck, N. L. (Contributor), @nilshg (Contributor), Evans, O. (Contributor), Gagarinov, P. (Contributor), Haraldsson, P. (Contributor), Huijzer, R. (Contributor), Franconville, R. (Contributor), Pigott, R. (Contributor), Shariff, R. (Contributor), Thomas, S. (Contributor), Rollén, S. (Contributor), Bromberger, S. (Contributor), Swaminathan, S. (Contributor), DuBois, T. (Contributor), DePrato, T. (Contributor), Thompson, W. (Contributor), Gagnon, Y. L. (Contributor), Chislett, B. (Contributor), @hhaensel (Contributor), @improbable22 (Contributor), Fleck, J. (Contributor), Czaban, P. (Contributor), @innerlee (Contributor), Cronqvist, M. (Contributor), Pengcheng, S. (Contributor), @wg030 (Contributor), Tebbutt, W. (Contributor), @t-bltg (Contributor), Callaway, F. (Contributor), Schneider, J. T. (Contributor), Phillips, L. (Contributor), Gillam, T. (Contributor), Leung, S. (Contributor), Zhi-Yuan, X. (Contributor), OBrien, N. (Contributor), Labuhn, H. (Contributor), Lee, S. (Contributor), Mair, J. (Contributor), Ruchikachorn, P. (Contributor), Boikov, I. (Contributor), Young, R. (Contributor), Moll, A. V. (Contributor), Agdestein, S. D. (Contributor) & Yong, P. (Contributor), Zenodo, 2024

  DOI: 10.5281/zenodo.13376892, https://zenodo.org/records/13376892

  Dataset

• Extended supplementary data for manuscript: A single dose of cocaine rewires the 3D genome structure of midbrain dopamine neurons

  Szabó, D. (Creator), Franke, V. (Creator), Bianco, S. (Creator), Batiuk, M. (Creator), Paul, E. (Creator), Kukalev, A. (Creator), Pfisterer, U. (Creator), Irastorza-Azcarate, I. (Creator), Chiariello, A. (Creator), Demharter, S. (Creator), Zea-Redondo, L. (Creator), Lopez-Atalaya, J. (Creator), Nicodemi, M. (Creator), Akalin, A. (Creator), Ungless, M. (Creator), Khodosevich, K. (Creator), Winick-Ng, W. (Creator), Pombo, A. (Creator), Szabó, D. (Contributor), Winick-Ng, W. (Contributor), Franke, V. (Contributor), Bianco, S. (Contributor), Batiuk, M. (Contributor), Paul, E. (Contributor), Kukalev, A. (Contributor), Irastorza-Azcarate, I. (Contributor), Lopez-Atalaya, J. (Contributor) & Pfisterer, U. (Contributor), Zenodo, 2024

  DOI: 10.5281/zenodo.10623661, https://zenodo.org10623661

  Dataset

• movenet: A Toolkit Facilitating the Use of Livestock Movement Data in Veterinary Public Health

  Bogaardt, C. (Creator), Widgren, S. (Creator), Graham, R. (Creator), Rosendal, T. (Creator), Hopp, P. (Creator), Enright, J. (Creator) & Denwood, M. (Creator), Zenodo, 2023

  DOI: 10.5281/zenodo.10412758, https://zenodo.org/records/10412758

  Dataset

• Disentangling concepts of inappropriate polypharmacy in old age: a scoping review

  Lau, S. R. (Creator), Waldorff, F. B. (Creator), Holm, A. (Creator), Frølich, A. (Creator), Andersen, J. S. (Creator), Sallerup, M. (Creator), Christensen, S. E. (Creator), Clausen, S. S. (Creator), Due, T. D. (Creator) & Hølmkjær, P. (Creator), figshare, 2023

  DOI: 10.6084/m9.figshare.c.6582643.v1, https://springernature.figshare.com/collections/Disentangling_concepts_of_inappropriate_polypharmacy_in_old_age_a_scoping_review/6582643/1

  Dataset

• Spontaneously hypertensive rats can become hydrocephalic despite undisturbed secretion and drainage of cerebrospinal fluid

  Lolansen, S. D. (Creator), Barbuskaite, D. (Creator), Ye, F. (Creator), Xiang, J. (Creator), Keep, R. F. (Creator) & MacAulay, N. (Creator), figshare, 2023

  DOI: 10.6084/m9.figshare.c.6726581, https://springernature.figshare.com/collections/Spontaneously_hypertensive_rats_can_become_hydrocephalic_despite_undisturbed_secretion_and_drainage_of_cerebrospinal_fluid/6726581

  Dataset

• Additional file 3 of The Danish-American Research Exchange (DARE): a cross-sectional study of a binational research education program

  Mehta, K. M. (Creator), Petersen, K. L. (Creator), Goodman, S. (Creator), Sørensen, H. T. (Creator), Bøgsted, M. (Creator), Olesen, J. D. (Creator), Burks, S. (Creator), Shaw, R. E. (Creator), Hove, J. D. (Creator), Ousager, J. (Creator), Milla, C. (Creator), Andersen, V. (Creator), Ejskjær, N. (Creator), Brix-Christensen, V. (Creator), Ghose, S. (Creator), Kjær, A. (Creator) & Chin-Hong, P. V. (Creator), figshare, 2023

  DOI: 10.6084/m9.figshare.22604626.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_The_Danish-American_Research_Exchange_DARE_a_cross-sectional_study_of_a_binational_research_education_program/22604626/1

  Dataset

• A cluster-randomized trial of a complex intervention to encourage deprescribing antidepressants in nursing home residents with dementia: a study protocol

  Hølmkjær, P. (Creator), Holm, A. (Creator), Overbeck, G. (Creator) & Rozing, M. P. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.5999733.v1, https://springernature.figshare.com/collections/A_cluster-randomized_trial_of_a_complex_intervention_to_encourage_deprescribing_antidepressants_in_nursing_home_residents_with_dementia_a_study_protocol/5999733/1

  Dataset

• Context dependency of nucleotide probabilities and variants in human DNA

  Liang, Y. (Creator), Grønbæk, C. (Creator), Fariselli, P. (Creator) & Krogh, A. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.5819663.v1, https://springernature.figshare.com/collections/Context_dependency_of_nucleotide_probabilities_and_variants_in_human_DNA/5819663/1

  Dataset

• Acetazolamide modulates intracranial pressure directly by its action on the cerebrospinal fluid secretion apparatus

  Barbuskaite, D. (Creator), Oernbo, E. K. (Creator), Wardman, J. H. (Creator), Toft-Bertelsen, T. L. (Creator), Conti, E. (Creator), Andreassen, S. N. (Creator), Gerkau, N. J. (Creator), Rose, C. R. (Creator) & MacAulay, N. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6072534.v1, https://springernature.figshare.com/collections/Acetazolamide_modulates_intracranial_pressure_directly_by_its_action_on_the_cerebrospinal_fluid_secretion_apparatus/6072534/1

  Dataset

• Short-term survival rates of 1397 horses referred for colic from 2010 to 2018

  Dybkjær, E. (Creator), Steffensen, K. F. (Creator), Honoré, M. L. (Creator), Dinesen, M. A. (Creator), Christophersen, M. T. (Creator) & Pihl, T. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.5984731.v1, https://springernature.figshare.com/collections/Short-term_survival_rates_of_1397_horses_referred_for_colic_from_2010_to_2018/5984731/1

  Dataset

• Birthweight, childhood body size, and timing of puberty and risks of breast cancer by menopausal status and tumor receptor subtypes

  Pedersen, D. C. (Creator), Jensen, B. W. (Creator), Tjønneland, A. (Creator), Andersen, Z. J. (Creator), Mellemkjaer, L. (Creator), Bjerregaard, L. G. (Creator), Aarestrup, J. (Creator) & Baker, J. L. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6295731.v1, https://springernature.figshare.com/collections/Birthweight_childhood_body_size_and_timing_of_puberty_and_risks_of_breast_cancer_by_menopausal_status_and_tumor_receptor_subtypes/6295731/1

  Dataset

• A convolutional neural network for total tumor segmentation in [64Cu]Cu-DOTATATE PET/CT of patients with neuroendocrine neoplasms

  Carlsen, E. A. (Creator), Lindholm, K. (Creator), Hindsholm, A. (Creator), Gæde, M. (Creator), Ladefoged, C. N. (Creator), Loft, M. (Creator), Johnbeck, C. B. (Creator), Langer, S. W. (Creator), Oturai, P. (Creator), Knigge, U. (Creator), Kjær, A. (Creator) & Andersen, F. L. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6019711, https://springernature.figshare.com/collections/A_convolutional_neural_network_for_total_tumor_segmentation_in_64Cu_Cu-DOTATATE_PET_CT_of_patients_with_neuroendocrine_neoplasms/6019711

  Dataset

• Severe α1-antitrypsin deficiency associated with lower blood pressure and reduced risk of ischemic heart disease: a cohort study of 91,540 individuals and a meta-analysis

  Winther, S. V. (Creator), Ahmed, D. (Creator), Al-Shuweli, S. (Creator), Landt, E. M. (Creator), Nordestgaard, B. G. (Creator), Seersholm, N. (Creator) & Dahl, M. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.5886891, https://springernature.figshare.com/collections/Severe_1-antitrypsin_deficiency_associated_with_lower_blood_pressure_and_reduced_risk_of_ischemic_heart_disease_a_cohort_study_of_91_540_individuals_and_a_meta-analysis/5886891

  Dataset

• Lysophosphatidic acid as a CSF lipid in posthemorrhagic hydrocephalus that drives CSF accumulation via TRPV4-induced hyperactivation of NKCC1

  Toft-Bertelsen, T. L. (Creator), Barbuskaite, D. (Creator), Heerfordt, E. K. (Creator), Lolansen, S. D. (Creator), Andreassen, S. N. (Creator), Rostgaard, N. (Creator), Olsen, M. H. (Creator), Norager, N. H. (Creator), Capion, T. (Creator), Rath, M. F. (Creator), Juhler, M. (Creator) & MacAulay, N. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6185625, https://springernature.figshare.com/collections/Lysophosphatidic_acid_as_a_CSF_lipid_in_posthemorrhagic_hydrocephalus_that_drives_CSF_accumulation_via_TRPV4-induced_hyperactivation_of_NKCC1/6185625

  Dataset

• Lack of ethics or lack of knowledge? European upper secondary students’ doubts and misconceptions about integrity issues

  Johansen, M. W. (Creator), Goddiksen, M. P. (Creator), Centa, M. (Creator), Clavien, C. (Creator), Gefenas, E. (Creator), Globokar, R. (Creator), Hogan, L. (Creator), Merit, M. T. (Creator), Nielsen, S. S. (Creator), Olsson, I. A. S. (Creator), Poškutė, M. (Creator), Quinn, U. (Creator), Santos, J. B. (Creator), Santos, R. (Creator), Schöpfer, C. (Creator), Strahovnik, V. (Creator), Wall, P. J. (Creator), Sandøe, P. (Creator) & Lund, T. B. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6143145, https://springernature.figshare.com/collections/Lack_of_ethics_or_lack_of_knowledge_European_upper_secondary_students_doubts_and_misconceptions_about_integrity_issues/6143145

  Dataset

• Digital patient-reported outcomes in inflammatory bowel disease routine clinical practice: the clinician perspective

  Nielsen, A. S. (Creator), Appel, C. W. (Creator), Larsen, B. F. (Creator), Hanna, L. (Creator) & Kayser, L. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.c.6006245, https://springernature.figshare.com/collections/Digital_patient-reported_outcomes_in_inflammatory_bowel_disease_routine_clinical_practice_the_clinician_perspective/6006245

  Dataset