Computational and RNA Biology

Search results

• Mapped read data and files and scripts from: Vicariance followed by secondary gene flow in a young gazelle species complex

  Garcia-Erill, G. (Creator), Kjær, M. M. (Creator), Albrechtsen, A. (Creator), Siegismund, H. R. (Creator) & Heller, R. (Creator), Dryad, 2020

  DOI: 10.5061/dryad.pzgmsbcjn, https://datadryad.org/stash/dataset/doi:10.5061/dryad.pzgmsbcjn

  Dataset

• Datasets associated with the publication of the "satuRn" R package

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Van den Berge, K. (Creator) & Clement, L. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.6810984, https://zenodo.org/record/6810984

  Dataset

• Extended data for the satuRn publication

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Berge, K. V. D. (Creator) & Clement, L. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.6810615, https://zenodo.org/records/6810615

  Dataset

• JASPAR TFBS LOLA databases - Part 2

  Mondragon, J. A. C. (Creator), Puig, R. R. (Creator), Rauluseviciute, I. (Creator), Lemma, R. B. (Creator), Turchi, L. (Creator), Blanc-Mathieu, R. (Creator), Lucas, J. (Creator), Boddie, P. (Creator), Khan, A. (Creator), Pérez, N. M. (Creator), Fornes, O. (Creator), Leung, T. Y. (Creator), Aguirre, A. (Creator), Hammal, F. (Creator), Schmelter, D. (Creator), Baranasic, D. (Creator), Ballester, B. (Creator), Sandelin, A. (Creator), Lenhard, B. (Creator), Vandepoele, K. (Creator), Wasserman, W. W. (Creator), Parcy, F. (Creator) & Mathelier, A. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.6860555, https://zenodo.org/records/6860555

  Dataset

• JASPAR TFBS LOLA databases - Part 1

  Mondragon, J. A. C. (Creator), Puig, R. R. (Creator), Rauluseviciute, I. (Creator), Lemma, R. B. (Creator), Turchi, L. (Creator), Blanc-Mathieu, R. (Creator), Lucas, J. (Creator), Boddie, P. (Creator), Khan, A. (Creator), Pérez, N. M. (Creator), Fornes, O. (Creator), Leung, T. Y. (Creator), Aguirre, A. (Creator), Hammal, F. (Creator), Schmelter, D. (Creator), Baranasic, D. (Creator), Ballester, B. (Creator), Sandelin, A. (Creator), Lenhard, B. (Creator), Vandepoele, K. (Creator), Wasserman, W. W. (Creator), Parcy, F. (Creator) & Mathelier, A. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.5555932, https://zenodo.org/record/5555932

  Dataset

• JASPAR TFBS LOLA databases - Part 2

  Mondragon, J. A. C. (Creator), Puig, R. R. (Creator), Rauluseviciute, I. (Creator), Lemma, R. B. (Creator), Turchi, L. (Creator), Blanc-Mathieu, R. (Creator), Lucas, J. (Creator), Boddie, P. (Creator), Khan, A. (Creator), Pérez, N. M. (Creator), Fornes, O. (Creator), Leung, T. Y. (Creator), Aguirre, A. (Creator), Hammal, F. (Creator), Schmelter, D. (Creator), Baranasic, D. (Creator), Ballester, B. (Creator), Sandelin, A. (Creator), Lenhard, B. (Creator), Vandepoele, K. (Creator), Wasserman, W. W. (Creator), Parcy, F. (Creator) & Mathelier, A. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.5555937, https://zenodo.org/record/5555937

  Dataset

• Catchment properties and the photosynthetic trait composition of freshwater plant communities

  Iversen, L. L. (Creator), Winkel, A. (Creator), Baastrup-Spohr, L. (Creator), Hinke, A. B. (Creator), Alahuhta, J. (Creator), Baattrup-Pedersen, A. (Creator), Birk, S. (Creator), Brodersen, P. (Creator), Chambers, P. A. (Creator), Ecke, F. (Creator), Feldmann, T. (Creator), Gebler, D. (Creator), Heino, J. (Creator), Jespersen, T. S. (Creator), Moe, S. J. (Creator), Riis, T. (Creator), Sass, L. (Creator), Vestergaard, O. (Creator), Maberly, S. C. (Creator), Sand-Jensen, K. (Creator) & Pedersen, O. (Creator), Zenodo, 2019

  DOI: 10.5061/dryad.18931zcrv, https://zenodo.org/record/5025348

  Dataset

• Source code for the publication of the "satuRn" R package

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Berge, K. V. D. (Creator) & Clement, L. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4655310, https://zenodo.org/record/4655310

  Dataset

• Transcription factor expression is the main determinant of variability in gene co-activity

  van Duin, L. (Creator), Krautz, R. (Creator), Rennie, S. (Creator) & Andersson, R. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.7180322, https://zenodo.org/records/7180322

  Dataset

• Mapped read data and files and scripts from: Vicariance followed by secondary gene flow in a young gazelle species complex

  Garcia-Erill, G. (Creator), Kjær, M. M. (Creator), Albrechtsen, A. (Creator), Siegismund, H. R. (Creator) & Heller, R. (Creator), Zenodo, 2020

  DOI: 10.5061/dryad.pzgmsbcjn, https://zenodo.org/record/4245143

  Dataset

• Datasets associated with the publication of the "satuRn" R package

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Van den Berge, K. (Creator) & Clement, L. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.6826603, https://zenodo.org/records/6826603

  Dataset

• Datasets associated with the publication of the "satuRn" R package

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Van den Berge, K. (Creator) & Clement, L. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4439415, https://zenodo.org/record/4439415

  Dataset

• Source code of the "satuRn" R package at the time of publication (snapshot satuRn v0.99.7)

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Berge, K. V. D. (Creator) & Clement, L. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4656084, https://zenodo.org/record/4656084

  Dataset

• Replication data and scripts for: Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters

  Louis, M. (Creator), Korlević, P. (Creator), Nykänen, M. (Creator), Archer, F. (Creator), Berrow, S. (Creator), Brownlow, A. (Creator), Lorenzen, E. (Creator), O'Brien, J. (Creator), Post, K. (Creator), Racimo, F. (Creator), Rogan, E. (Creator), Rosel, P. (Creator), Sinding, M. (Creator), Van Der Es, H. (Creator), Wales, N. (Creator), Fontaine, M. C. (Creator), Gaggiotti, O. (Creator), Foote, A. (Creator), Louis, M. (Contributor), Foote, A. (Contributor) & Fontaine, M. C. (Contributor), DataSuds, 2023

  DOI: 10.23708/dabawd, https://dataverse.ird.fr/citation?persistentId=doi:10.23708/DABAWD

  Dataset

• Extended data for the satuRn publication

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Berge, K. V. D. (Creator) & Clement, L. (Creator), Zenodo, 2021

  DOI: 10.5281/zenodo.4701228, https://zenodo.org/record/4701228

  Dataset

• Source code for the publication of the "satuRn" R package

  Gilis, J. (Creator), Vitting-Seerup, K. (Creator), Berge, K. V. D. (Creator) & Clement, L. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.6826612, https://zenodo.org/records/6826612

  Dataset

• FANTOM5 transcribed enhancers in mm10

  Dalby, M. (Creator), Rennie, S. (Creator) & Andersson, R. (Creator), Zenodo, 2018

  DOI: 10.5281/zenodo.1411211, https://zenodo.org/record/1411211

  Dataset

• Catchment properties and the photosynthetic trait composition of freshwater plant communities

  Iversen, L. L. (Creator), Winkel, A. (Creator), Baastrup-Spohr, L. (Creator), Hinke, A. B. (Creator), Alahuhta, J. (Creator), Baattrup-Pedersen, A. (Creator), Birk, S. (Creator), Brodersen, P. (Creator), Chambers, P. A. (Creator), Ecke, F. (Creator), Feldmann, T. (Creator), Gebler, D. (Creator), Heino, J. (Creator), Jespersen, T. S. (Creator), Moe, S. J. (Creator), Riis, T. (Creator), Sass, L. (Creator), Vestergaard, O. (Creator), Maberly, S. C. (Creator), Sand-Jensen, K. (Creator) & Pedersen, O. (Creator), Dryad, 2019

  DOI: 10.5061/dryad.18931zcrv, http://datadryad.org/stash/dataset/doi:10.5061/dryad.18931zcrv

  Dataset

• JASPAR TFBS LOLA databases - Part 1

  Mondragon, J. A. C. (Creator), Puig, R. R. (Creator), Rauluseviciute, I. (Creator), Lemma, R. B. (Creator), Turchi, L. (Creator), Blanc-Mathieu, R. (Creator), Lucas, J. (Creator), Boddie, P. (Creator), Khan, A. (Creator), Pérez, N. M. (Creator), Fornes, O. (Creator), Leung, T. Y. (Creator), Aguirre, A. (Creator), Hammal, F. (Creator), Schmelter, D. (Creator), Baranasic, D. (Creator), Ballester, B. (Creator), Sandelin, A. (Creator), Lenhard, B. (Creator), Vandepoele, K. (Creator), Wasserman, W. W. (Creator), Parcy, F. (Creator) & Mathelier, A. (Creator), Zenodo, 2022

  DOI: 10.5281/zenodo.6860527, https://zenodo.org/records/6860527

  Dataset