Coalescent inference using serially sampled, high-throughput sequencing data from intrahost HIV infection

Kevin Dialdestoro; Jonas Andreas Sibbesen; Lasse Maretty Sørensen; Jayna Raghwani; Astrid Gall; Paul Kellam; Oliver G. Pybus; Jotun Hein; Paul A. Jenkins

doi:10.1534/genetics.115.177931

Coalescent inference using serially sampled, high-throughput sequencing data from intrahost HIV infection

Kevin Dialdestoro, Jonas Andreas Sibbesen, Lasse Maretty Sørensen, Jayna Raghwani, Astrid Gall, Paul Kellam, Oliver G. Pybus, Jotun Hein, Paul A. Jenkins

Bioinformatik og RNA Biologi

9 Citationer (Scopus)

Originalsprog	Engelsk
Tidsskrift	Genetics (Print)
Vol/bind	202
Udgave nummer	4
Sider (fra-til)	1449-1472
Antal sider	24
ISSN	0016-6731
DOI	https://doi.org/10.1534/genetics.115.177931
Status	Udgivet - apr. 2016

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10.1534/genetics.115.177931

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title = "Coalescent inference using serially sampled, high-throughput sequencing data from intrahost HIV infection",

keywords = "coalescent, importance sampling, HIV evolution, conditional sampling distribution, recombination",

author = "Kevin Dialdestoro and Sibbesen, {Jonas Andreas} and S{\o}rensen, {Lasse Maretty} and Jayna Raghwani and Astrid Gall and Paul Kellam and Pybus, {Oliver G.} and Jotun Hein and Jenkins, {Paul A.}",

year = "2016",

month = apr,

doi = "10.1534/genetics.115.177931",

language = "English",

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publisher = "The Genetics Society of America (GSA)",

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T1 - Coalescent inference using serially sampled, high-throughput sequencing data from intrahost HIV infection

AU - Dialdestoro, Kevin

AU - Sibbesen, Jonas Andreas

AU - Sørensen, Lasse Maretty

AU - Raghwani, Jayna

AU - Gall, Astrid

AU - Kellam, Paul

AU - Pybus, Oliver G.

AU - Hein, Jotun

AU - Jenkins, Paul A.

PY - 2016/4

Y1 - 2016/4

KW - coalescent

KW - importance sampling

KW - HIV evolution

KW - conditional sampling distribution

KW - recombination

U2 - 10.1534/genetics.115.177931

DO - 10.1534/genetics.115.177931

M3 - Journal article

C2 - 26857628

SN - 0016-6731

VL - 202

SP - 1449

EP - 1472

JO - Genetics (Print)

JF - Genetics (Print)

IS - 4

ER -

Coalescent inference using serially sampled, high-throughput sequencing data from intrahost HIV infection

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