Triangular prism-shaped β-peptoid helices as unique biomimetic scaffolds

Jonas S Laursen, Pernille Harris, Peter Fristrup, Christian A Olsen

55 Citations (Scopus)

Abstract

β-Peptoids are peptidomimetics based on N-alkylated β-aminopropionic acid residues (or N-alkyl-β-alanines). This type of peptide mimic has previously been incorporated in biologically active ligands and has been hypothesized to be able to exhibit foldamer properties. Here we show, for the first time, that β-peptoids can be tuned to fold into stable helical structures. We provide high-resolution X-ray crystal structures of homomeric β-peptoid hexamers, which reveal right-handed helical conformations with exactly three residues per turn and a helical pitch of 9.6-9.8Å between turns. The presence of folded conformations in solution is supported by circular dichroism spectroscopy showing length- and solvent dependency, and molecular dynamics simulations provide further support for a stabilized helical secondary structure in organic solvent. We thus outline a framework for future design of novel biomimetics that display functional groups with high accuracy in three dimensions, which has potential for development of new functional materials.

Original languageEnglish
Article number7013
JournalNature Communications
Volume6
Pages (from-to)1-10
Number of pages10
ISSN2041-1723
DOIs
Publication statusPublished - 5 May 2015
Externally publishedYes

Keywords

  • Biomimetic Materials
  • Circular Dichroism
  • Crystallography, X-Ray
  • Drug Design
  • Isomerism
  • Molecular Dynamics Simulation
  • Peptoids
  • Protein Folding
  • Protein Multimerization
  • Protein Structure, Secondary
  • Spectrometry, Fluorescence
  • Structure-Activity Relationship
  • Tissue Scaffolds
  • Journal Article
  • Research Support, Non-U.S. Gov't

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