Tolerance of Sulfolobus SMV1 virus to the immunity of I-A and III-B CRISPR-Cas systems in Sulfolobus islandicus

Tong Guo, Wenyuan Han*, Qunxin She

*Corresponding author for this work
8 Citations (Scopus)

Abstract

Sulfolobus islandicus Rey15A encodes one Type I-A and two Type III-B systems, all of which are active in mediating nucleic acids interference. However, the effectiveness of each CRISPR system against virus infection was not tested in this archaeon. Here we constructed S. islandicus strains that constitutively express the antiviral immunity from either I-A, or III-B, or I-A plus III-B systems against SMV1 and tested the response of each host to SMV1 infection. We found that, although both CRISPR immunities showed a strong inhibition to viral DNA replication at an early stage of incubation, the host I-A CRISPR immunity gradually lost the control on virus proliferation, allowing accumulation of cellular viral DNA and release of a large number of viral particles. In contrast, the III-B CRISPR immunity showed a tight control on both viral DNA replication and virus particle formation. Furthermore, the SMV1 tolerance to the I-A CRISPR immunity did not result from the occurrence of escape mutations, suggesting the virus probably encodes an anti-CRISPR protein (Acr) to compromise the host I-A CRISPR immunity. Together, this suggests that the interplay between viral Acrs and CRISPR-Cas systems in thermophilic archaea could have shaped the stable virus-host relationship that is observed for many archaeal viruses.

Original languageEnglish
JournalRNA Biology
Volume16
Issue number4
Pages (from-to)549-556
Number of pages8
ISSN1547-6286
DOIs
Publication statusPublished - 3 Apr 2019

Keywords

  • anti-CRISPR
  • archaeal host-virus coevolution
  • CRISPR-Cas systems
  • I-A CRISPR system
  • III-B Cmr system
  • mini-CRISPR arrays
  • SMV1 virus
  • stable virus carrier status
  • Sulfolobus islandicus

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