Shedding light on protein folding, structural and functional dynamics by single molecule studies

Krutika Bavishi, Nikos Hatzakis*

*Corresponding author for this work
14 Citations (Scopus)

Abstract

The advent of advanced single molecule measurements unveiled a great wealth of dynamic information revolutionizing our understanding of protein dynamics and behavior in ways unattainable by conventional bulk assays. Equipped with the ability to record distribution of behaviors rather than the mean property of a population, single molecule measurements offer observation and quantification of the abundance, lifetime and function of multiple protein states. They also permit the direct observation of the transient and rarely populated intermediates in the energy landscape that are typically averaged out in non-synchronized ensemble measurements. Single molecule studies have thus provided novel insights about how the dynamic sampling of the free energy landscape dictates all aspects of protein behavior; from its folding to function. Here we will survey some of the state of the art contributions in deciphering mechanisms that underlie protein folding, structural and functional dynamics by single molecule fluorescence microscopy techniques. We will discuss a few selected examples highlighting the power of the emerging techniques and finally discuss the future improvements and directions.

Original languageEnglish
JournalMolecules
Volume19
Issue number12
Pages (from-to)19407-19434
Number of pages28
ISSN1420-3049
DOIs
Publication statusPublished - 2014

Keywords

  • Allosteric regulation
  • Conformational dynamics
  • Free energy landscape
  • Protein folding
  • Single molecule FRET
  • Single molecules

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