RNA secondary structure diagrams for very large molecules: RNAfdl

Nikolai Hecker; Tim Wiegels; Andrew E. Torda

doi:10.1093/bioinformatics/btt496

RNA secondary structure diagrams for very large molecules: RNAfdl

Nikolai Hecker, Tim Wiegels, Andrew E. Torda

11 Citations (Scopus)

Abstract

Summary: There are many programs that can read the secondary structure of an RNA molecule and draw a diagram, but hardly any that can cope with 103 bases. RNAfdl is slow but capable of producing intersection-free diagrams for ribosome-sized structures, has a graphical user interface for adjustments and produces output in common formats.

Original language	English
Journal	Bioinformatics
Volume	29
Issue number	22
Pages (from-to)	2941-2942
Number of pages	2
ISSN	1367-4803
DOIs	https://doi.org/10.1093/bioinformatics/btt496
Publication status	Published - 15 Nov 2013

Access to Document

10.1093/bioinformatics/btt496

Cite this

@article{16dd2a39f13c4f8db6f8a7c0ad3053e5,

title = "RNA secondary structure diagrams for very large molecules: RNAfdl",

abstract = "Summary: There are many programs that can read the secondary structure of an RNA molecule and draw a diagram, but hardly any that can cope with 103 bases. RNAfdl is slow but capable of producing intersection-free diagrams for ribosome-sized structures, has a graphical user interface for adjustments and produces output in common formats.",

author = "Nikolai Hecker and Tim Wiegels and Torda, {Andrew E.}",

year = "2013",

month = nov,

day = "15",

doi = "10.1093/bioinformatics/btt496",

language = "English",

volume = "29",

pages = "2941--2942",

journal = "Bioinformatics",

issn = "1367-4803",

publisher = "Oxford University Press",

number = "22",

}

TY - JOUR

T1 - RNA secondary structure diagrams for very large molecules: RNAfdl

AU - Hecker, Nikolai

AU - Wiegels, Tim

AU - Torda, Andrew E.

PY - 2013/11/15

Y1 - 2013/11/15

N2 - Summary: There are many programs that can read the secondary structure of an RNA molecule and draw a diagram, but hardly any that can cope with 103 bases. RNAfdl is slow but capable of producing intersection-free diagrams for ribosome-sized structures, has a graphical user interface for adjustments and produces output in common formats.

AB - Summary: There are many programs that can read the secondary structure of an RNA molecule and draw a diagram, but hardly any that can cope with 103 bases. RNAfdl is slow but capable of producing intersection-free diagrams for ribosome-sized structures, has a graphical user interface for adjustments and produces output in common formats.

U2 - 10.1093/bioinformatics/btt496

DO - 10.1093/bioinformatics/btt496

M3 - Journal article

C2 - 23975766

SN - 1367-4803

VL - 29

SP - 2941

EP - 2942

JO - Bioinformatics

JF - Bioinformatics

IS - 22

ER -

RNA secondary structure diagrams for very large molecules: RNAfdl

Abstract

Access to Document

Fingerprint

Cite this