Pharmacophore-driven identification of PPAR¿ agonists from natural sources

Rasmus Koefoed Petersen, Kathrine Bisgaard Christensen, Andreana N Assimopoulou, Xavier Fretté, Vassilios P Papageorgiou, Karsten Kristiansen, Irene Kouskoumvekaki

40 Citations (Scopus)

Abstract

In a search for more effective and safe anti-diabetic compounds, we developed a pharmacophore model based on partial agonists of PPARγ. The model was used for the virtual screening of the Chinese Natural Product Database (CNPD), a library of plant-derived natural products primarily used in folk medicine. From the resulting hits, we selected methyl oleanonate, a compound found, among others, in Pistacia lentiscus var. Chia oleoresin (Chios mastic gum). The acid of methyl oleanonate, oleanonic acid, was identified as a PPARγ agonist through bioassay-guided chromatographic fractionations of Chios mastic gum fractions, whereas some other sub-fractions exhibited also biological activity towards PPARγ. The results from the present work are two-fold: on the one hand we demonstrate that the pharmacophore model we developed is able to select novel ligand scaffolds that act as PPARγ agonists; while at the same time it manifests that natural products are highly relevant for use in virtual screening-based drug discovery.

Original languageEnglish
JournalJournal of Computer - Aided Molecular Design
Volume25
Issue number2
Pages (from-to)107-16
Number of pages10
ISSN0920-654X
DOIs
Publication statusPublished - Feb 2011

Keywords

  • Animals
  • Cell Line
  • Dose-Response Relationship, Drug
  • Drug Discovery
  • Fibroblasts
  • Hypoglycemic Agents
  • Mice
  • PPAR gamma
  • Pistacia
  • Plant Extracts
  • Triterpenes

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