GlycoSuiteDB: A curated relational database of glycoprotein glycan structures and their biological sources. 2003 update

Catherine A. Cooper; Hiren J. Joshi; Mathew J. Harrison; Marc R. Wilkins; Nicolle H. Packer

doi:10.1093/nar/gkg099

GlycoSuiteDB: A curated relational database of glycoprotein glycan structures and their biological sources. 2003 update

Catherine A. Cooper^*, Hiren J. Joshi, Mathew J. Harrison, Marc R. Wilkins, Nicolle H. Packer

^*Corresponding author for this work

Glycomics Program

108 Citations (Scopus)

Abstract

GlycoSuiteDB is an annotated and curated relational database of glycan structures reported in the literature. It contains information on the glycan type, core type, linkages and anomeric configurations, mass, composition and the analytical methods used by the researchers to determine the glycan structure. Native and recombinant sources are detailed, including species, tissue and/or cell type, cell line, strain, life stage, disease, and if known the protein to which the glycan structures are attached. There are links to SWISS-PROT/TrEMBL and PubMed where applicable. Recent developments include the implementation of searching by 2D structure and substructure, disease and reference. The database is updated twice a year, and now contains over 7650 entries. Access to GlycoSuiteDB is available at http://www.glycosuite.com.

Original language	English
Journal	Nucleic Acids Research
Volume	31
Issue number	1
Pages (from-to)	511-513
Number of pages	3
ISSN	0305-1048
DOIs	https://doi.org/10.1093/nar/gkg099
Publication status	Published - 1 Jan 2003

Access to Document

10.1093/nar/gkg099

Cite this

@article{f19e67ab25a8440180d645e12894bf7f,

title = "GlycoSuiteDB: A curated relational database of glycoprotein glycan structures and their biological sources. 2003 update",

abstract = "GlycoSuiteDB is an annotated and curated relational database of glycan structures reported in the literature. It contains information on the glycan type, core type, linkages and anomeric configurations, mass, composition and the analytical methods used by the researchers to determine the glycan structure. Native and recombinant sources are detailed, including species, tissue and/or cell type, cell line, strain, life stage, disease, and if known the protein to which the glycan structures are attached. There are links to SWISS-PROT/TrEMBL and PubMed where applicable. Recent developments include the implementation of searching by 2D structure and substructure, disease and reference. The database is updated twice a year, and now contains over 7650 entries. Access to GlycoSuiteDB is available at http://www.glycosuite.com.",

author = "Cooper, {Catherine A.} and Joshi, {Hiren J.} and Harrison, {Mathew J.} and Wilkins, {Marc R.} and Packer, {Nicolle H.}",

year = "2003",

month = jan,

day = "1",

doi = "10.1093/nar/gkg099",

language = "English",

volume = "31",

pages = "511--513",

journal = "Nucleic Acids Research",

issn = "0305-1048",

publisher = "Oxford University Press",

number = "1",

}

TY - JOUR

T1 - GlycoSuiteDB

T2 - A curated relational database of glycoprotein glycan structures and their biological sources. 2003 update

AU - Cooper, Catherine A.

AU - Joshi, Hiren J.

AU - Harrison, Mathew J.

AU - Wilkins, Marc R.

AU - Packer, Nicolle H.

PY - 2003/1/1

Y1 - 2003/1/1

N2 - GlycoSuiteDB is an annotated and curated relational database of glycan structures reported in the literature. It contains information on the glycan type, core type, linkages and anomeric configurations, mass, composition and the analytical methods used by the researchers to determine the glycan structure. Native and recombinant sources are detailed, including species, tissue and/or cell type, cell line, strain, life stage, disease, and if known the protein to which the glycan structures are attached. There are links to SWISS-PROT/TrEMBL and PubMed where applicable. Recent developments include the implementation of searching by 2D structure and substructure, disease and reference. The database is updated twice a year, and now contains over 7650 entries. Access to GlycoSuiteDB is available at http://www.glycosuite.com.

AB - GlycoSuiteDB is an annotated and curated relational database of glycan structures reported in the literature. It contains information on the glycan type, core type, linkages and anomeric configurations, mass, composition and the analytical methods used by the researchers to determine the glycan structure. Native and recombinant sources are detailed, including species, tissue and/or cell type, cell line, strain, life stage, disease, and if known the protein to which the glycan structures are attached. There are links to SWISS-PROT/TrEMBL and PubMed where applicable. Recent developments include the implementation of searching by 2D structure and substructure, disease and reference. The database is updated twice a year, and now contains over 7650 entries. Access to GlycoSuiteDB is available at http://www.glycosuite.com.

UR - http://www.scopus.com/inward/record.url?scp=0037250530&partnerID=8YFLogxK

U2 - 10.1093/nar/gkg099

DO - 10.1093/nar/gkg099

M3 - Review

C2 - 12520065

AN - SCOPUS:0037250530

SN - 0305-1048

VL - 31

SP - 511

EP - 513

JO - Nucleic Acids Research

JF - Nucleic Acids Research

IS - 1

ER -

GlycoSuiteDB: A curated relational database of glycoprotein glycan structures and their biological sources. 2003 update

Abstract

Access to Document

Other files and links

Fingerprint

Cite this