Epigenetics and Gene Expression in Cancer, Inflammatory and Immune Diseases: Targeted DNA Methylation Analysis Methods

D. Cheishvili, S. Petropoulos, S. Christiansen, M. Szyf

1 Citation (Scopus)

Abstract

DNA methylation is an important enzymatic covalent modification of DNA that plays an important role in genome regulation. DNA methylation patterns are fashioned during development and could be altered in response to experience and exposure. Aberrations in DNA methylation patterns are noted in cancer and other diseases. It is therefore extremely important to accurately quantify DNA methylation states for studying physiology and disease as well as for using DNA methylation markers in diagnosis. Here, we review the most commonly used methods for quantifying DNA methylation states of single genes: Pyrosequencing, Quantitative Methylated DNA Immunoprecipitation (qMeDIP), and methylation-sensitive high resolution melting (MS-HRM). Each method is described and required steps are detailed. We also discuss the advantages and disadvantages of the different methods.
Original languageEnglish
Place of PublicationHumana Press, New York, NY
PublisherHumana Press
ISBN (Print)978-1-4939-6741-4
ISBN (Electronic)978-1-4939-6743-8
DOIs
Publication statusPublished - 2017
Externally publishedYes
SeriesMethods in Pharmacology and Toxicology
ISSN1557-2153

Keywords

  • [DNA methylation, Methylation-sensitive high resol

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