Comparison of RNA-seq and microarray-based models for clinical endpoint prediction

Wenqian Zhang; Ying Yu; Falk Hertwig; Jean Thierry-Mieg; Wenwei Zhang; Danielle Thierry-Mieg; Jian Wang; Cesare Furlanello; Viswanath Devanarayan; Jie Cheng; Youping Deng; Barbara Hero; Huixiao Hong; Meiwen Jia; Li Li; Simon M. Lin; Yuri Nikolsky; Andre Oberthuer; Tao Qing; Zhenqiang Su; Ruth Volland; Charles Wang; May D. Wang; Junmei Ai; Davide Albanese; Shahab Asgharzadeh; Smadar Avigad; Wenjun Bao; Marina Bessarabova; Murray H. Brilliant; Benedikt Brors; Marco Chierici; Tzu-Ming Chu; Jibin Zhang; Richard G. Grundy; Min Max He; Scott Hebbring; Howard L. Kaufman; Samir Lababidi; Lee J. Lancashire; Yan Li; Xin X. Lu; Heng Luo; Xiwen Ma; Baitang Ning; Rosa Noguera; Martin Peifer; John H. Phan; Frederik Roels; Carolina Rosswog; Susan Shao; Jie Shen; Jessica Theissen; Gian Paolo Tonini; Jo Vandesompele; Po-Yen Wu; Wenzhong Xiao; Joshua Xu; Weihong Xu; Jiekun Xuan; Yong Yang; Zhan Ye; Zirui Dong; Ke K. Zhang; Ye Yin; Chen Zhao; Yuanting Zheng; Russell D. Wolfinger; Tieliu Shi; Linda H. Malkas; Frank Berthold; Jun Wang; Weida Tong; Leming Shi; Zhiyu Peng; Matthias Fischer

doi:10.1186/s13059-015-0694-1

Comparison of RNA-seq and microarray-based models for clinical endpoint prediction

Wenqian Zhang, Ying Yu, Falk Hertwig, Jean Thierry-Mieg, Wenwei Zhang, Danielle Thierry-Mieg, Jian Wang, Cesare Furlanello, Viswanath Devanarayan, Jie Cheng, Youping Deng, Barbara Hero, Huixiao Hong, Meiwen Jia, Li Li, Simon M. Lin, Yuri Nikolsky, Andre Oberthuer, Tao Qing, Zhenqiang SuRuth Volland, Charles Wang, May D. Wang, Junmei Ai, Davide Albanese, Shahab Asgharzadeh, Smadar Avigad, Wenjun Bao, Marina Bessarabova, Murray H. Brilliant, Benedikt Brors, Marco Chierici, Tzu-Ming Chu, Jibin Zhang, Richard G. Grundy, Min Max He, Scott Hebbring, Howard L. Kaufman, Samir Lababidi, Lee J. Lancashire, Yan Li, Xin X. Lu, Heng Luo, Xiwen Ma, Baitang Ning, Rosa Noguera, Martin Peifer, John H. Phan, Frederik Roels, Carolina Rosswog, Susan Shao, Jie Shen, Jessica Theissen, Gian Paolo Tonini, Jo Vandesompele, Po-Yen Wu, Wenzhong Xiao, Joshua Xu, Weihong Xu, Jiekun Xuan, Yong Yang, Zhan Ye, Zirui Dong, Ke K. Zhang, Ye Yin, Chen Zhao, Yuanting Zheng, Russell D. Wolfinger, Tieliu Shi, Linda H. Malkas, Frank Berthold, Jun Wang, Weida Tong, Leming Shi, Zhiyu Peng, Matthias Fischer

Genome Research and Molecular Bio Medicine

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Original language	English
Article number	133
Journal	Genome Biology (Online Edition)
Volume	16
Number of pages	12
ISSN	1465-6906
DOIs	https://doi.org/10.1186/s13059-015-0694-1
Publication status	Published - 25 Jun 2015

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Zhang, W., Yu, Y., Hertwig, F., Thierry-Mieg, J., Zhang, W., Thierry-Mieg, D., Wang, J., Furlanello, C., Devanarayan, V., Cheng, J., Deng, Y., Hero, B., Hong, H., Jia, M., Li, L., Lin, S. M., Nikolsky, Y., Oberthuer, A., Qing, T., ... Fischer, M. (2015). Comparison of RNA-seq and microarray-based models for clinical endpoint prediction. Genome Biology (Online Edition), 16, [133]. https://doi.org/10.1186/s13059-015-0694-1

Zhang, W, Yu, Y, Hertwig, F, Thierry-Mieg, J, Zhang, W, Thierry-Mieg, D, Wang, J, Furlanello, C, Devanarayan, V, Cheng, J, Deng, Y, Hero, B, Hong, H, Jia, M, Li, L, Lin, SM, Nikolsky, Y, Oberthuer, A, Qing, T, Su, Z, Volland, R, Wang, C, Wang, MD, Ai, J, Albanese, D, Asgharzadeh, S, Avigad, S, Bao, W, Bessarabova, M, Brilliant, MH, Brors, B, Chierici, M, Chu, T-M, Zhang, J, Grundy, RG, He, MM, Hebbring, S, Kaufman, HL, Lababidi, S, Lancashire, LJ, Li, Y, Lu, XX, Luo, H, Ma, X, Ning, B, Noguera, R, Peifer, M, Phan, JH, Roels, F, Rosswog, C, Shao, S, Shen, J, Theissen, J, Tonini, GP, Vandesompele, J, Wu, P-Y, Xiao, W, Xu, J, Xu, W, Xuan, J, Yang, Y, Ye, Z, Dong, Z, Zhang, KK, Yin, Y, Zhao, C, Zheng, Y, Wolfinger, RD, Shi, T, Malkas, LH, Berthold, F, Wang, J, Tong, W, Shi, L, Peng, Z & Fischer, M 2015, 'Comparison of RNA-seq and microarray-based models for clinical endpoint prediction', Genome Biology (Online Edition), vol. 16, 133. https://doi.org/10.1186/s13059-015-0694-1

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AU - Deng, Youping

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AU - Hong, Huixiao

AU - Jia, Meiwen

AU - Li, Li

AU - Lin, Simon M.

AU - Nikolsky, Yuri

AU - Oberthuer, Andre

AU - Qing, Tao

AU - Su, Zhenqiang

AU - Volland, Ruth

AU - Wang, Charles

AU - Wang, May D.

AU - Ai, Junmei

AU - Albanese, Davide

AU - Asgharzadeh, Shahab

AU - Avigad, Smadar

AU - Bao, Wenjun

AU - Bessarabova, Marina

AU - Brilliant, Murray H.

AU - Brors, Benedikt

AU - Chierici, Marco

AU - Chu, Tzu-Ming

AU - Zhang, Jibin

AU - Grundy, Richard G.

AU - He, Min Max

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AU - Kaufman, Howard L.

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AU - Lancashire, Lee J.

AU - Li, Yan

AU - Lu, Xin X.

AU - Luo, Heng

AU - Ma, Xiwen

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AU - Noguera, Rosa

AU - Peifer, Martin

AU - Phan, John H.

AU - Roels, Frederik

AU - Rosswog, Carolina

AU - Shao, Susan

AU - Shen, Jie

AU - Theissen, Jessica

AU - Tonini, Gian Paolo

AU - Vandesompele, Jo

AU - Wu, Po-Yen

AU - Xiao, Wenzhong

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AU - Xu, Weihong

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AU - Wolfinger, Russell D.

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AU - Berthold, Frank

AU - Wang, Jun

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AU - Shi, Leming

AU - Peng, Zhiyu

AU - Fischer, Matthias

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DO - 10.1186/s13059-015-0694-1

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JO - Genome Biology (Online Edition)

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Comparison of RNA-seq and microarray-based models for clinical endpoint prediction

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