Cephalopod genomics: a plan of strategies and organization

Caroline B. Albertin; Laure Bonnaud; C. Titus Brown; Wendy J. Crookes-Goodson; Rute Andreia Rodrigues da Fonseca; Carlo Di Cristo; Brian P. Dilkes; Eric Edsinger-Gonzales; Robert M. Freeman, Jr.; Roger T. Hanlon; Kristen M. Koenig; Annie R. Lindgren; Mark Q. Martindale; Patrick Minx; Leonid L. Moroz; Marie-Therese Nödl; Spencer V. Nyholm; Atsushi Ogura; Judit R. Pungor; Joshua J. C. Rosenthal; Erich M. Schwarz; Shuichi Shigeno; Jan M. Strugnell; Tim Wollesen; Guojie Zhang; Clifton W. Ragsdale

doi:10.4056/sigs.3136559

Cephalopod genomics: a plan of strategies and organization

Caroline B. Albertin, Laure Bonnaud, C. Titus Brown, Wendy J. Crookes-Goodson, Rute Andreia Rodrigues da Fonseca, Carlo Di Cristo, Brian P. Dilkes, Eric Edsinger-Gonzales, Robert M. Freeman, Jr., Roger T. Hanlon, Kristen M. Koenig, Annie R. Lindgren, Mark Q. Martindale, Patrick Minx, Leonid L. Moroz, Marie-Therese Nödl, Spencer V. Nyholm, Atsushi Ogura, Judit R. Pungor, Joshua J. C. RosenthalErich M. Schwarz, Shuichi Shigeno, Jan M. Strugnell, Tim Wollesen, Guojie Zhang, Clifton W. Ragsdale

42 Citations (Scopus)

63 Downloads (Pure)

Abstract

The Cephalopod Sequencing Consortium (CephSeq Consortium) was established at a NESCent Catalysis Group Meeting, ``Paths to Cephalopod Genomics-Strategies, Choices, Organization,'' held in Durham, North Carolina, USA on May 24-27, 2012. Twenty-eight participants representing nine countries (Austria, Australia, China, Denmark, France, Italy, Japan, Spain and the USA) met to address the pressing need for genome sequencing of cephalopod mollusks. This group, drawn from cephalopod biologists, neuroscientists, developmental and evolutionary biologists, materials scientists, bioinformaticians and researchers active in sequencing, assembling and annotating genomes, agreed on a set of cephalopod species of particular importance for initial sequencing and developed strategies and an organization (CephSeq Consortium) to promote this sequencing. The conclusions and recommendations of this meeting are described in this white paper.

Original language	English
Article number	1
Journal	Standards in Genomic Sciences
Volume	7
Pages (from-to)	175-188
Number of pages	14
ISSN	1944-3277
DOIs	https://doi.org/10.4056/sigs.3136559
Publication status	Published - 2012

Access to Document

10.4056/sigs.3136559Licence: CC BY-SA

Albertin_2012_Cephalopod_genomicsFinal published version, 328 KBLicence: CC BY-SA

Cite this

Albertin, C. B., Bonnaud, L., Brown, C. T., Crookes-Goodson, W. J., Rodrigues da Fonseca, R. A., Di Cristo, C., Dilkes, B. P., Edsinger-Gonzales, E., Freeman, Jr., R. M., Hanlon, R. T., Koenig, K. M., Lindgren, A. R., Martindale, M. Q., Minx, P., Moroz, L. L., Nödl, M-T., Nyholm, S. V., Ogura, A., Pungor, J. R., ... Ragsdale, C. W. (2012). Cephalopod genomics: a plan of strategies and organization. Standards in Genomic Sciences, 7, 175-188. [1]. https://doi.org/10.4056/sigs.3136559

Albertin, CB, Bonnaud, L, Brown, CT, Crookes-Goodson, WJ, Rodrigues da Fonseca, RA, Di Cristo, C, Dilkes, BP, Edsinger-Gonzales, E, Freeman, Jr., RM, Hanlon, RT, Koenig, KM, Lindgren, AR, Martindale, MQ, Minx, P, Moroz, LL, Nödl, M-T, Nyholm, SV, Ogura, A, Pungor, JR, Rosenthal, JJC, Schwarz, EM, Shigeno, S, Strugnell, JM, Wollesen, T, Zhang, G & Ragsdale, CW 2012, 'Cephalopod genomics: a plan of strategies and organization', Standards in Genomic Sciences, vol. 7, 1, pp. 175-188. https://doi.org/10.4056/sigs.3136559

@article{df6ce27c999f4fcfb4081f68d8df5997,

title = "Cephalopod genomics: a plan of strategies and organization",

abstract = "The Cephalopod Sequencing Consortium (CephSeq Consortium) was established at a NESCent Catalysis Group Meeting, ``Paths to Cephalopod Genomics-Strategies, Choices, Organization,'' held in Durham, North Carolina, USA on May 24-27, 2012. Twenty-eight participants representing nine countries (Austria, Australia, China, Denmark, France, Italy, Japan, Spain and the USA) met to address the pressing need for genome sequencing of cephalopod mollusks. This group, drawn from cephalopod biologists, neuroscientists, developmental and evolutionary biologists, materials scientists, bioinformaticians and researchers active in sequencing, assembling and annotating genomes, agreed on a set of cephalopod species of particular importance for initial sequencing and developed strategies and an organization (CephSeq Consortium) to promote this sequencing. The conclusions and recommendations of this meeting are described in this white paper.",

author = "Albertin, {Caroline B.} and Laure Bonnaud and Brown, {C. Titus} and Crookes-Goodson, {Wendy J.} and {Rodrigues da Fonseca}, {Rute Andreia} and {Di Cristo}, Carlo and Dilkes, {Brian P.} and Eric Edsinger-Gonzales and {Freeman, Jr.}, {Robert M.} and Hanlon, {Roger T.} and Koenig, {Kristen M.} and Lindgren, {Annie R.} and Martindale, {Mark Q.} and Patrick Minx and Moroz, {Leonid L.} and Marie-Therese N{\"o}dl and Nyholm, {Spencer V.} and Atsushi Ogura and Pungor, {Judit R.} and Rosenthal, {Joshua J. C.} and Schwarz, {Erich M.} and Shuichi Shigeno and Strugnell, {Jan M.} and Tim Wollesen and Guojie Zhang and Ragsdale, {Clifton W.}",

year = "2012",

doi = "10.4056/sigs.3136559",

language = "English",

volume = "7",

pages = "175--188",

journal = "Standards in Genomic Sciences",

issn = "1944-3277",

publisher = "BioMed Central Ltd.",

}

TY - JOUR

T1 - Cephalopod genomics

T2 - a plan of strategies and organization

AU - Albertin, Caroline B.

AU - Bonnaud, Laure

AU - Brown, C. Titus

AU - Crookes-Goodson, Wendy J.

AU - Rodrigues da Fonseca, Rute Andreia

AU - Di Cristo, Carlo

AU - Dilkes, Brian P.

AU - Edsinger-Gonzales, Eric

AU - Freeman, Jr., Robert M.

AU - Hanlon, Roger T.

AU - Koenig, Kristen M.

AU - Lindgren, Annie R.

AU - Martindale, Mark Q.

AU - Minx, Patrick

AU - Moroz, Leonid L.

AU - Nödl, Marie-Therese

AU - Nyholm, Spencer V.

AU - Ogura, Atsushi

AU - Pungor, Judit R.

AU - Rosenthal, Joshua J. C.

AU - Schwarz, Erich M.

AU - Shigeno, Shuichi

AU - Strugnell, Jan M.

AU - Wollesen, Tim

AU - Zhang, Guojie

AU - Ragsdale, Clifton W.

PY - 2012

Y1 - 2012

N2 - The Cephalopod Sequencing Consortium (CephSeq Consortium) was established at a NESCent Catalysis Group Meeting, ``Paths to Cephalopod Genomics-Strategies, Choices, Organization,'' held in Durham, North Carolina, USA on May 24-27, 2012. Twenty-eight participants representing nine countries (Austria, Australia, China, Denmark, France, Italy, Japan, Spain and the USA) met to address the pressing need for genome sequencing of cephalopod mollusks. This group, drawn from cephalopod biologists, neuroscientists, developmental and evolutionary biologists, materials scientists, bioinformaticians and researchers active in sequencing, assembling and annotating genomes, agreed on a set of cephalopod species of particular importance for initial sequencing and developed strategies and an organization (CephSeq Consortium) to promote this sequencing. The conclusions and recommendations of this meeting are described in this white paper.

AB - The Cephalopod Sequencing Consortium (CephSeq Consortium) was established at a NESCent Catalysis Group Meeting, ``Paths to Cephalopod Genomics-Strategies, Choices, Organization,'' held in Durham, North Carolina, USA on May 24-27, 2012. Twenty-eight participants representing nine countries (Austria, Australia, China, Denmark, France, Italy, Japan, Spain and the USA) met to address the pressing need for genome sequencing of cephalopod mollusks. This group, drawn from cephalopod biologists, neuroscientists, developmental and evolutionary biologists, materials scientists, bioinformaticians and researchers active in sequencing, assembling and annotating genomes, agreed on a set of cephalopod species of particular importance for initial sequencing and developed strategies and an organization (CephSeq Consortium) to promote this sequencing. The conclusions and recommendations of this meeting are described in this white paper.

U2 - 10.4056/sigs.3136559

DO - 10.4056/sigs.3136559

M3 - Journal article

C2 - 23451296

SN - 1944-3277

VL - 7

SP - 175

EP - 188

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

M1 - 1

ER -