Analysis of fluorescent pseudomonads based on 23S ribosomal DNA sequences

H Christensen; M Boye; L K Poulsen; O F Rasmussen

Analysis of fluorescent pseudomonads based on 23S ribosomal DNA sequences

H Christensen, M Boye, L K Poulsen, O F Rasmussen

12 Citations (Scopus)

Abstract

The regions from positions 1391 to 1545 and 1620 to 1865 (Escherichia coli numbers) of the 23S ribosomal DNA sequences have been analyzed for a number of Pseudomonas fluorescens and P. putida isolates. Variability was observed only in three smaller regions from positions 1484 to 1508, 1531 to 1542, and 1714 to 1748, corresponding to helices 58, 59, and 63, respectively, where up to 53% dissimilarity was found. Sequence analysis did not allow clear distinctions among P. fluorescens biovars, P. chlororaphis, and P. putida biovar B.

Original language	English
Journal	Applied and Environmental Microbiology
Volume	60
Issue number	6
Pages (from-to)	2196-9
ISSN	0099-2240
Publication status	Published - 1994
Externally published	Yes

Keywords

Base Sequence
DNA, Bacterial/genetics
DNA, Ribosomal/genetics
Genetic Variation
Molecular Sequence Data
Pseudomonas fluorescens/chemistry
Pseudomonas putida/chemistry
RNA, Ribosomal, 23S/genetics
Sequence Homology, Nucleic Acid
Species Specificity

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@article{5841681181994e1e8bfbeb6d455e7702,

title = "Analysis of fluorescent pseudomonads based on 23S ribosomal DNA sequences",

abstract = "The regions from positions 1391 to 1545 and 1620 to 1865 (Escherichia coli numbers) of the 23S ribosomal DNA sequences have been analyzed for a number of Pseudomonas fluorescens and P. putida isolates. Variability was observed only in three smaller regions from positions 1484 to 1508, 1531 to 1542, and 1714 to 1748, corresponding to helices 58, 59, and 63, respectively, where up to 53% dissimilarity was found. Sequence analysis did not allow clear distinctions among P. fluorescens biovars, P. chlororaphis, and P. putida biovar B.",

keywords = "Base Sequence, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Genetic Variation, Molecular Sequence Data, Pseudomonas fluorescens/chemistry, Pseudomonas putida/chemistry, RNA, Ribosomal, 23S/genetics, Sequence Homology, Nucleic Acid, Species Specificity",

author = "H Christensen and M Boye and Poulsen, {L K} and Rasmussen, {O F}",

year = "1994",

language = "English",

volume = "60",

pages = "2196--9",

journal = "Applied and Environmental Microbiology",

issn = "0099-2240",

publisher = "American Society for Microbiology",

number = "6",

}

TY - JOUR

T1 - Analysis of fluorescent pseudomonads based on 23S ribosomal DNA sequences

AU - Christensen, H

AU - Boye, M

AU - Poulsen, L K

AU - Rasmussen, O F

PY - 1994

Y1 - 1994

N2 - The regions from positions 1391 to 1545 and 1620 to 1865 (Escherichia coli numbers) of the 23S ribosomal DNA sequences have been analyzed for a number of Pseudomonas fluorescens and P. putida isolates. Variability was observed only in three smaller regions from positions 1484 to 1508, 1531 to 1542, and 1714 to 1748, corresponding to helices 58, 59, and 63, respectively, where up to 53% dissimilarity was found. Sequence analysis did not allow clear distinctions among P. fluorescens biovars, P. chlororaphis, and P. putida biovar B.

AB - The regions from positions 1391 to 1545 and 1620 to 1865 (Escherichia coli numbers) of the 23S ribosomal DNA sequences have been analyzed for a number of Pseudomonas fluorescens and P. putida isolates. Variability was observed only in three smaller regions from positions 1484 to 1508, 1531 to 1542, and 1714 to 1748, corresponding to helices 58, 59, and 63, respectively, where up to 53% dissimilarity was found. Sequence analysis did not allow clear distinctions among P. fluorescens biovars, P. chlororaphis, and P. putida biovar B.

KW - Base Sequence

KW - DNA, Bacterial/genetics

KW - DNA, Ribosomal/genetics

KW - Genetic Variation

KW - Molecular Sequence Data

KW - Pseudomonas fluorescens/chemistry

KW - Pseudomonas putida/chemistry

KW - RNA, Ribosomal, 23S/genetics

KW - Sequence Homology, Nucleic Acid

KW - Species Specificity

M3 - Letter

C2 - 8031104

SN - 0099-2240

VL - 60

SP - 2196

EP - 2199

JO - Applied and Environmental Microbiology

JF - Applied and Environmental Microbiology

IS - 6

ER -

Analysis of fluorescent pseudomonads based on 23S ribosomal DNA sequences

Abstract

Keywords

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