A fast and easy real-time PCR genotyping method for the HLA-G 14-bp insertion/deletion polymorphism in the 3' untranslated region

S Djurisic, A E Sørensen, T V F Hviid

    17 Citations (Scopus)

    Abstract

    Human leukocyte antigen-G (HLA-G) is a non-classical HLA class Ib molecule shown to exhibit immunomodulatory function in a wide range of immune-based disorders. A number of functional HLA-G gene polymorphisms have been identified, including a 14-bp insertion/deletion polymorphism in exon 8 of the 3' untranslated region of the HLA-G gene, which has been associated with HLA-G mRNA stability. Moreover, studies show that homozygosity for the 14-bp insertion/deletion polymorphism is associated with lower HLA-G mRNA and protein levels and unique alternative splicing patterns. Here, we introduce a quick and reliable method to screen for the HLA-G 14-bp insertion/deletion polymorphism using an optimized real-time polymerase chain reaction protocol. The genotyping assay has been validated by comparison with conventional methods. As results can be obtained within a few hours, the assay will have a potential for clinical use.
    Original languageEnglish
    JournalHLA
    Volume79
    Issue number3
    Pages (from-to)186-9
    Number of pages4
    ISSN2059-2302
    DOIs
    Publication statusPublished - Mar 2012

    Keywords

    • 3' Untranslated Regions
    • Base Sequence
    • Electrophoresis, Polyacrylamide Gel
    • Genotyping Techniques
    • HLA-G Antigens
    • Humans
    • Molecular Sequence Data
    • Mutagenesis, Insertional
    • Polymorphism, Genetic
    • Real-Time Polymerase Chain Reaction
    • Reproducibility of Results
    • Sequence Deletion
    • Time Factors

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