SvABA: genome-wide detection of structural variants and indels by local assembly

Jeremiah A Wala, Pratiti Bandopadhayay, Noah F Greenwald, Ryan O'Rourke, Ted Sharpe, Chip Stewart, Steve Schumacher, Yilong Li, Joachim Weischenfeldt, Xiaotong Yao, Chad Nusbaum, Peter Campbell, Gad Getz, Matthew Meyerson, Cheng-Zhong Zhang, Marcin Imielinski, Rameen Beroukhim