Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance

Alexandre Fort, Kosuke Hashimoto, Daisuke Yamada, Md Salimullah, Chaman A. Keya, Alka Saxena, Alessandro Bonetti, Irina Voineagu, Nicolas Bertin, Anton Kratz, Yukihiko Noro, Chee-Hong Wong, Michiel de Hoon, Robin Andersson, Albin Gustav Sandelin, Harukazu Suzuki, Chia-Lin Wei, Haruhiko Koseki, Yuki Hasegawa, Alistair R R ForrestPiero Carninci, FANTOM Consortium