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DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses
Marie Lisandra Zepeda Mendoza
*
,
Kristine Bohmann
, Aldo Carmona Baez,
Tom Gilbert
*
Corresponding author af dette arbejde
26
Citationer (Scopus)
88
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Keyphrases
DNA Metabarcoding
100%
Initial Preparation
100%
Amplicon
100%
PCR Duplicates
100%
Unique Sequences
25%
Copy number
25%
Sampling numbers
25%
Multiplex PCR (mPCR)
16%
Sequencing Library
16%
Taxonomic Assignment
8%
Complex Dataset
8%
Efficient Analysis
8%
Background DNA
8%
Ease of Handling
8%
Taxonomic Characterization
8%
Minimum Length
8%
Genetic Loci
8%
Chimera
8%
PCR Errors
8%
5′-nucleotides
8%
Sequence Content
8%
Locus-specific
8%
Environmental Samples
8%
High-throughput Sequencing
8%
Multiple Samples
8%
Biochemistry, Genetics and Molecular Biology
Amplicon
100%
Metabarcoding
100%
Taxon
28%
Filtration
14%
High Throughput Sequencing
14%
Nucleotide
14%
Gene Locus
14%
Immunology and Microbiology
Amplicon
100%
Taxon
28%
High Throughput Sequencing
14%
Gene Locus
14%