Generic residue numbering of the GAIN domain of adhesion GPCRs

  • Florian Seufert (Ophavsmand)
  • Guillermo Pérez-Hernández (Ophavsmand)
  • Gáspár Pándy-Szekeres (Ophavsmand)
  • Ramon Guixa-Gonzalez (Ophavsmand)
  • Tobias Langenhan (Ophavsmand)
  • David E. Gloriam (Ophavsmand)
  • Peter Werner Hildebrand (Ophavsmand)

Data set

Beskrivelse

The dataset corresponding to the publication: Generic residue numbering of the GAIN domain of adhesion GPCRs Florian Seufert, Guillermo Pérez-Hernández, Gáspár Pándy-Szekeres, Ramon Guixà-González, Tobias Langenhan, David E. Gloriam, Peter W. Hildebrand ReasearchSquare https://doi.org/10.21203/rs.3.rs-4761600/v1 The archive consists of three files: gaingrn_data.tgz Contains the underlying data and object structures for the GAIN-GRN creation process and the python package availabe in https://github.com/FloSeu/GAIN-GRN. This can be downloaded manually and extracted in the respective GAIN-GRN/ directory or automatically retrieved via a dedicated function agpcr_gains.tgz Contains the best (rank 1) PDB model of the ColabFold/AlphaFold2 workflow for each adhesion GPCR GAIN domain, named by its UniProt accession number. pkd_gains.tgz Contains the best (rank 1) PDB model of the ColabFold/AlphaFold2 workflow for each polycystic kidney disease (PKD1) / PKD1-like 1 protein (PKD1L1) GAIN domain, named by its UniProt accession number.
Dato for tilgængelighed4 okt. 2024
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