Beskrivelse
This repository contains the dataset employed in the paper Fast spline detection in high density microscopy data. Three files are provided: 1. videos.zip: raw experimental videos. 2. labeled_data.zip: labelled sections of experimental videos used for evaluation 3. syntehthic_dataset.zip: synthetic dataset used for training Labelled data Sections are named as VIDEONAME_FRAMENUMBER_SECTIONID. All labels are in labels.json and correspond to the middle frame of the clip (05.png). Example plotting script is provided (plot_data.py). Synthetic data Clips are named as NUMBEROFWORMS_ID. Labels (for all frames) are stored in labels.npy. Example plotting script is provided (plot_data.py). Related Paper: https://arxiv.org/abs/2301.04460 Deeptangle code: https://github.com/kirkegaardlab/deeptangle Labelling tool: https://github.com/kirkegaardlab/deeptanglelabel --- If used, please cite Albert Alonso & Julius B. Kirkegaard. Fast spline detection in high density microscopy data. 2023.
Dato for tilgængelighed | 2023 |
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Forlag | Zenodo |