A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices

  • Frederik Filip Vinggaard Stæger (Ophavsmand)
  • Kristian Mortensen (Ophavsmand)
  • Louis Kaufmann (Ophavsmand)
  • Hajime Hirase (Ophavsmand)
  • Maiken Nedergaard (Ophavsmand)
  • German Neuroinformatics Node (Bidrager)

    Data set

    Beskrivelse

    The full data set and pipeline for constructing the three-dimensional, population-based average of the C57BL/6 mouse brain form DAPI-stained coronal slices. This repository also contains a python implementation of automatic coronal brain slice segmentation. The data set constitutes of all the raw slice images (.tif) in full resolution, the pre-processed version (.nii), the individually reconstructed brain volumes, and the final population-based average.
    Dato for tilgængelighed2019
    ForlagG-Node

    Citationsformater